RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TMEM222Q9H0R3 208 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 WSB1Q9Y6I7 421 aa5.23□□□□□ -1.57
SMAD4-212ENST00000591126 GREB1Q4ZG55 1949 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 TRBV6-6A0A0A6YYG2 114 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 BUB1B-PAK6H3BSN5 160 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 AREGP15514 252 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 WNT5AP41221 380 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 FAM120AOSQ5T036 256 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF497Q6ZNH5 498 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 TMPRSS5Q9H3S3 457 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SEC16AO15027 2179 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 RIF1Q5UIP0 2472 aaKnown RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 GBF1Q92538 1859 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 MFSD2BA6NFX1 497 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 C15orf61A6NNL5 157 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 ICMTO60725 284 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 G6PCP35575 357 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 PI4KAP42356 2102 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SPCS2Q15005 226 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 C5orf64Q2M2E5 130 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 FAM159AQ6UWV7 190 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SIGLECL1Q8N7X8 197 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 OR1N2Q8NGR9 330 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 OR2K2Q8NGT1 345 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 RGP1Q92546 391 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 YIPF5Q969M3 257 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 PEF1Q9UBV8 284 aaKnown RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 C9orf170A2RU37 121 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 OR2J3O76001 311 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SAA4P35542 130 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 CD69Q07108 199 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 IRF3Q14653 427 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SMUG1Q53HV7 270 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM200BQ69YZ2 307 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 REC114Q7Z4M0 266 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 OR4B1Q8NGF8 309 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 UBALD1Q8TB05 177 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SEC22AQ96IW7 307 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 PAXXQ9BUH6 204 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF230Q9UIE0 474 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 TCF19Q9Y242 345 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 PGLYRP1O75594 196 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 CGAP01215 116 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 RPLP1P05386 114 aaKnown RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 UNC119Q13432 240 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 MORN2Q502X0 79 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 OTPQ5XKR4 325 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 AMMECR1LQ6DCA0 310 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 PRSS45Q7RTY3 260 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 H1FOOQ8IZA3 346 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 VN1R17PQ8TDU5 208 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 RNF138Q8WVD3 245 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 SRSF12Q8WXF0 261 aaKnown RBP5.22□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM160Q9NX00 188 aa5.22□□□□□ -1.57
SMAD4-212ENST00000591126 BRWD1Q9NSI6 2320 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV1-3A0A0C4DH29 117 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 PGPA6NDG6 321 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 SHISA9B4DS77 424 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 J3KRW8 73 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 PDGFAP04085 211 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 HSPB1P04792 205 aaKnown RBP5.21□□□□□ -1.57
SMAD4-212ENST00000591126 PTHLHP12272 177 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 SLAQ13239 276 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 ELOBQ15370 118 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 GLDNQ6ZMI3 551 aaPredicted RBP5.21□□□□□ -1.57
SMAD4-212ENST00000591126 EIF4E3Q8N5X7 224 aaKnown RBP5.21□□□□□ -1.57
SMAD4-212ENST00000591126 TPRX1Q8N7U7 411 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 MRGPRFQ96AM1 343 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 GAFA1Q96PS6 74 aa5.21□□□□□ -1.57
SMAD4-212ENST00000591126 TPRP12270 2363 aaKnown RBP5.21□□□□□ -1.58
SMAD4-212ENST00000591126 A0A1W2PPE3 182 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 SEC14L6B5MCN3 397 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 UPK2O00526 184 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 PDE6DO43924 150 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 RHOGP84095 191 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 LY6G6FQ5SQ64 297 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 Q6ZN92 141 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 LRRTM1Q86UE6 522 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 OR10G4Q8NGN3 311 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 OR10G9Q8NGN4 311 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 OR10G7Q8NGN6 311 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 OR52E5Q8NH55 327 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 DNAJC4Q9NNZ3 241 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 NAGKQ9UJ70 344 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 KLHDC2Q9Y2U9 406 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 ESPL1Q14674 2120 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 DOCK8Q8NF50 2099 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 GPX1P07203 203 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 RAB4AP20338 218 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 RND2P52198 227 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM50BP56557 158 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM116Q8NCL8 245 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 OR10AC1Q8NH08 325 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 NRG4Q8WWG1 115 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 FRZBQ92765 325 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 ATP6V0BQ99437 205 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 PCP4L1A6NKN8 68 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 H0YL77 283 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms