RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 C1RLQ9NZP8 487 aa12.12□□□□□ -0.47
DDX39A-211ENST00000590239 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 BTBD17A6NE02 478 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 CCSO14618 274 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 RRHO14718 337 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 SLC25A17O43808 307 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 OR2F2O95006 317 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 NDUFA3O95167 84 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 CRYGBP07316 175 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 SMCO1Q147U7 214 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 MMDQ15546 238 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 FBLN7Q53RD9 439 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
DDX39A-211ENST00000590239 C16orf82Q7Z2V1 217 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 TMEM167AQ8TBQ9 72 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 RBM14Q96PK6 669 aaKnown RBP12.11□□□□□ -0.47
DDX39A-211ENST00000590239 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
DDX39A-211ENST00000590239 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 UPK2O00526 184 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 SNAPC5O75971 98 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 KBTBD11O94819 623 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 CXCL3P19876 107 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 CNTFRP26992 372 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 F2RL1P55085 397 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 H2BFSP57053 126 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
DDX39A-211ENST00000590239 IAH1Q2TAA2 248 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-211ENST00000590239 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
DDX39A-211ENST00000590239 Q6ZRM9 215 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-211ENST00000590239 METTL1Q9UBP6 276 aaKnown RBP12.1□□□□□ -0.47
DDX39A-211ENST00000590239 CACNG5Q9UF02 275 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
DDX39A-211ENST00000590239 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
DDX39A-211ENST00000590239 INAFM1C9JVW0 142 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 M0QZK8 103 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 SIX6O95475 246 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 CYCSP99999 105 aaKnown RBP12.09□□□□□ -0.47
DDX39A-211ENST00000590239 RELBQ01201 579 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 AARDQ4LEZ3 155 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 Q71RC1 249 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-211ENST00000590239 PPP1R27Q86WC6 154 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 FAM71E2Q8N5Q1 922 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 OR4A16Q8NH70 328 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 SLC25A33Q9BSK2 321 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 ZNF436Q9C0F3 470 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-211ENST00000590239 VPREB3Q9UKI3 123 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 PRNDQ9UKY0 176 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 MOB4Q9Y3A3 225 aa12.09□□□□□ -0.47
DDX39A-211ENST00000590239 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 FGF16O43320 207 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 HOXA3O43365 443 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 PITX3O75364 302 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 GIPP09681 153 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 MAS1LP35410 378 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 PLGLAQ15195 96 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 LY6EQ16553 131 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 PRSS8Q16651 343 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 TMEM219Q86XT9 240 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 MMD2Q8IY49 270 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 Q8N9W7 124 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 ZBTB8BQ8NAP8 495 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 NMES1Q9C002 83 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 RANBP3Q9H6Z4 567 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 ZNF430Q9H8G1 570 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
DDX39A-211ENST00000590239 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-211ENST00000590239 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 FAM90A26D6RGX4 464 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 CRLF1O75462 422 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 RAP2BP61225 183 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
DDX39A-211ENST00000590239 IL15RAQ13261 267 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 MRGPRG-AS1Q2M3A8 158 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 ZNF418Q8TF45 676 aaPredicted RBP12.07□□□□□ -0.48
DDX39A-211ENST00000590239 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms