RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 TNFRSF9Q07011 255 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
CXXC1-212ENST00000589940 RITA1Q96K30 269 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 MFFQ9GZY8 342 aa14.03□□□□□ -0.16
CXXC1-212ENST00000589940 IGHV3OR16-10A0A075B7F0 116 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 AVPP01185 164 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 CXCL2P19875 107 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 OR2B8PP59922 312 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 INO80EQ8NBZ0 244 aaPredicted RBP14.02□□□□□ -0.16
CXXC1-212ENST00000589940 VSTM2AQ8TAG5 236 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 RNF5Q99942 180 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.16
CXXC1-212ENST00000589940 NOTCH2Q04721 2471 aa14.02□□□□□ -0.17
CXXC1-212ENST00000589940 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
CXXC1-212ENST00000589940 PVALBP20472 110 aaPredicted RBP14.02□□□□□ -0.17
CXXC1-212ENST00000589940 CYB5R2Q6BCY4 276 aa14.02□□□□□ -0.17
CXXC1-212ENST00000589940 ZNF429Q86V71 674 aa14.02□□□□□ -0.17
CXXC1-212ENST00000589940 QTRT1Q9BXR0 403 aaKnown RBP14.02□□□□□ -0.17
CXXC1-212ENST00000589940 C11orf1Q9H5F2 150 aa14.02□□□□□ -0.17
CXXC1-212ENST00000589940 FLNAP21333 2647 aaKnown RBP14.01□□□□□ -0.17
CXXC1-212ENST00000589940 RNF222A6NCQ9 220 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 UPK2O00526 184 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 KCNAB3O43448 404 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 SYNGR2O43760 224 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 CHST1O43916 411 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 KBTBD11O94819 623 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 UBE2KP61086 200 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 VMA21Q3ZAQ7 101 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 BRD3OSQ6XYD6 125 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 ACOT7LQ6ZUV0 252 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 CIARTQ8N365 385 aaPredicted RBP14.01□□□□□ -0.17
CXXC1-212ENST00000589940 TSNAXQ99598 290 aaKnown RBP14.01□□□□□ -0.17
CXXC1-212ENST00000589940 PLSCR3Q9NRY6 295 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 CACFD1Q9UGQ2 172 aa14.01□□□□□ -0.17
CXXC1-212ENST00000589940 FOXA2Q9Y261 457 aaPredicted RBP14.01□□□□□ -0.17
CXXC1-212ENST00000589940 L7N2F9 121 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 ZNF345Q14585 488 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 KLF17Q5JT82 389 aaPredicted RBP14□□□□□ -0.17
CXXC1-212ENST00000589940 OR4A5Q8NH83 315 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 TMEM14BQ9NUH8 114 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 PRNDQ9UKY0 176 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 MED6O75586 246 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 OR2F2O95006 317 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 MOSP00540 346 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 IGKV1D-33P01593 117 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 IGKV1-33P01594 117 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 NUP62P37198 522 aaPredicted RBP14□□□□□ -0.17
CXXC1-212ENST00000589940 OR2F1Q13607 317 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 OR52E5Q8NH55 327 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 TMEM167AQ8TBQ9 72 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 RAB40CQ96S21 281 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 TEX15Q9BXT5 2789 aa14□□□□□ -0.17
CXXC1-212ENST00000589940 SLC25A17O43808 307 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 P2RY1P47900 373 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 AP2S1P53680 142 aaPredicted RBP13.99□□□□□ -0.17
CXXC1-212ENST00000589940 VAMP2P63027 116 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 AQP10Q96PS8 301 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 RBKSQ9H477 322 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 ABCA1O95477 2261 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 MSGN1A6NI15 193 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 TMEM50AO95807 157 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 IFNA17P01571 189 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 SNRNP70P08621 437 aaKnown RBP13.99□□□□□ -0.17
CXXC1-212ENST00000589940 BRS3P32247 399 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 SPCS3P61009 180 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 PDLIM3Q53GG5 364 aaPredicted RBP13.99□□□□□ -0.17
CXXC1-212ENST00000589940 TEX45Q8NA69 505 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 OR2T10Q8NGZ9 312 aa13.99□□□□□ -0.17
CXXC1-212ENST00000589940 A0A0D9SG52 128 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 CD24P25063 80 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 CNTFRP26992 372 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 RPL12P30050 165 aaKnown RBP13.98□□□□□ -0.17
CXXC1-212ENST00000589940 EBI3Q14213 229 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 HES1Q14469 280 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 PSG5Q15238 335 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 TMUB2Q71RG4 321 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 EAF1Q96JC9 268 aaPredicted RBP13.98□□□□□ -0.17
CXXC1-212ENST00000589940 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 WSB1Q9Y6I7 421 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 SMAD7O15105 426 aaKnown RBP13.98□□□□□ -0.17
CXXC1-212ENST00000589940 SPDEFO95238 335 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 HKR1P10072 659 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 IAPPP10997 89 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 S100A11P31949 105 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 PAX9P55771 341 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 RPL8P62917 257 aaKnown RBP13.98□□□□□ -0.17
CXXC1-212ENST00000589940 KCNRGQ8N5I3 272 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 ARL6Q9H0F7 186 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 LYRM2Q9NU23 88 aaPredicted RBP13.98□□□□□ -0.17
CXXC1-212ENST00000589940 NUP50Q9UKX7 468 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 ZNF257Q9Y2Q1 563 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 OR51B2Q9Y5P1 312 aa13.98□□□□□ -0.17
CXXC1-212ENST00000589940 A0A0U1RQK1 487 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 GPR137BO60478 399 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 FGF2P09038 288 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 C4BPBP20851 252 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 TAS2R30P59541 319 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms