RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	IGHV3-11	P01762	117 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	LGALS1	P09382	135 aa	Known RBP	13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	HOXD3	P31249	432 aa	Predicted RBP	13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	TPPP2	P59282	170 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	SSX9	Q7RTT3	188 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	LHFPL1	Q86WI0	220 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	MMD2	Q8IY49	270 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	OR4D10	Q8NGI6	311 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	TMEM68	Q96MH6	324 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	RSRP1	Q9BUV0	290 aa		13.36	□□□□□ -0.27
MBD1-221	ENST00000589867	IGHV4OR15-8	A0A075B7B6	117 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867		A0A087WW49	117 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867		H3BUA1	57 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	RGS5	O15539	181 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	DUS4L	O95620	317 aa	Known RBP	13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	TRGV3	P03979	118 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	CD74	P04233	296 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	CD3D	P04234	171 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	RLN1	P04808	185 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	ZNF45	Q02386	682 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	ZNF616	Q08AN1	781 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	OR4A47	Q6IF82	309 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	C19orf35	Q6ZS72	473 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	SLA2	Q9H6Q3	261 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	BET1L	Q9NYM9	111 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	SCOC	Q9UIL1	159 aa		13.35	□□□□□ -0.27
MBD1-221	ENST00000589867	HMX3	A6NHT5	357 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	GABARAP	H6UMI1	98 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	GPR31	O00270	319 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	HPRT1	P00492	218 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	ZNF735	P0CB33	412 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	SLURP1	P55000	103 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	UCP3	P55916	312 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	RAB25	P57735	213 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	TAS2R31	P59538	309 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	CATR1	Q13166	79 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	PHLDA2	Q53GA4	152 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	MRGPRF	Q96AM1	343 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	PLEKHA2	Q9HB19	425 aa		13.34	□□□□□ -0.27
MBD1-221	ENST00000589867	HRAS	P01112	189 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	PRH1	P02810	166 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	OR9G9	P0C7N8	305 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	F2R	P25116	425 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	TTC9C	Q8N5M4	171 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	VSTM2A	Q8TAG5	236 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	FCAMR	Q8WWV6	532 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	DCUN1D4	Q92564	292 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	DLX4	Q92988	240 aa	Predicted RBP	13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	DGCR14	Q96DF8	476 aa	Known RBP	13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	SORL1	Q92673	2214 aa		13.33	□□□□□ -0.28
MBD1-221	ENST00000589867	TRBV9	A0A0B4J1U6	114 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867		K7EIL1	84 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	UPK2	O00526	184 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	CTDSPL	O15194	276 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	TRBV12-3	P01733	135 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	OR8U8	P0C7N1	319 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	NQO2	P16083	231 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	TNFSF8	P32971	234 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	TSPAN5	P62079	268 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	TMEM229B	Q8NBD8	167 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	CD300LF	Q8TDQ1	290 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	SMIM4	Q8WVI0	70 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	BORCS5	Q969J3	196 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	DIRAS2	Q96HU8	199 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	PHB2	Q99623	299 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	MCRIP2	Q9BUT9	160 aa	Known RBP	13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	ZNF355P	Q9NSJ1	428 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	COMMD9	Q9P000	198 aa		13.32	□□□□□ -0.28
MBD1-221	ENST00000589867	LINC01619	G3V211	115 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	CREBL2	O60519	120 aa	Predicted RBP	13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	IGKV1-39	P01597	117 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	IGKV1D-39	P04432	117 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	HSPB1	P04792	205 aa	Known RBP	13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	AREG	P15514	252 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	RPA2	P15927	270 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	HLA-G	P17693	338 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	MAS1L	P35410	378 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	LPAR6	P43657	344 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	RPL27A	P46776	148 aa	Known RBP	13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	RPL8	P62917	257 aa	Known RBP	13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	KLK9	Q2XQG4	91 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	RNASE10	Q5GAN6	216 aa	Known RBP	13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	OR4A5	Q8NH83	315 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	C15orf40	Q8WUR7	153 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	FANCD2OS	Q96PS1	177 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	SPIN2A	Q99865	258 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	SPIN2B	Q9BPZ2	258 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	TMEM140	Q9NV12	185 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	COA4	Q9NYJ1	87 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	KLK9	Q9UKQ9	250 aa		13.31	□□□□□ -0.28
MBD1-221	ENST00000589867	ACTL6B	O94805	426 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	PI3	P19957	117 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	TBP	P20226	339 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	OR2B8P	P59922	312 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	MRPS10	P82664	201 aa	Known RBP	13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	FAAP20	Q6NZ36	180 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	ZNF343	Q6P1L6	599 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	REC114	Q7Z4M0	266 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms