RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PCOTHQ58A44 107 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 LHFPL1Q86WI0 220 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM156Q8N614 296 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 UBL4BQ8N7F7 174 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 DAND5Q8N907 189 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 JOSD2Q8TAC2 188 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 DCANP1Q8TF63 244 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 SLC35G5Q96KT7 338 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM109Q9BVC6 243 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM222Q9H0R3 208 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 ZNHIT6Q9NWK9 470 aaKnown RBP1.35□□□□□ -2.19
SMAD4-207ENST00000589076 USE1Q9NZ43 259 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 C5orf42Q9H799 3197 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 DOCK10Q96BY6 2186 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 CELSR2Q9HCU4 2923 aa1.35□□□□□ -2.19
SMAD4-207ENST00000589076 MAP3K5Q99683 1374 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.19
SMAD4-207ENST00000589076 CR1P17927 2039 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 BRCA2P51587 3418 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 IGLV3-9A0A075B6K5 115 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 TYMSP04818 313 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 HLA-DQB2P05538 268 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 ZNF728P0DKX0 622 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 GABRA2P47869 451 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 CTBP2P56545 445 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 KRTAP12-1P59990 96 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 FKBP1AP62942 108 aaKnown RBP1.34□□□□□ -2.19
SMAD4-207ENST00000589076 ZNF90Q03938 601 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 PPP1R1AQ13522 171 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 PABPC1L2AQ5JQF8 200 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 OGFRL1Q5TC84 451 aaPredicted RBP1.34□□□□□ -2.19
SMAD4-207ENST00000589076 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 Q6ZS52 159 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 SLC51BQ86UW2 128 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 LHFPL5Q8TAF8 219 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 HAVCR2Q8TDQ0 301 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 SMCR5Q8TEV8 140 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 C12orf43Q96C57 262 aaKnown RBP1.34□□□□□ -2.19
SMAD4-207ENST00000589076 OR52B2Q96RD2 323 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 PRO2289Q9P1D8 64 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 POLR3HQ9Y535 204 aaPredicted RBP1.34□□□□□ -2.19
SMAD4-207ENST00000589076 CPAMD8Q8IZJ3 1885 aa1.34□□□□□ -2.19
SMAD4-207ENST00000589076 GREB1Q4ZG55 1949 aa1.34□□□□□ -2.2
SMAD4-207ENST00000589076 PIEZO2Q9H5I5 2752 aa1.34□□□□□ -2.2
SMAD4-207ENST00000589076 KDM5CP41229 1560 aa1.34□□□□□ -2.2
SMAD4-207ENST00000589076 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.2
SMAD4-207ENST00000589076 HMCN2Q8NDA2 5059 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 RIMBP3CA6NJZ7 1639 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 RIMBP3BA6NNM3 1639 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 RIMBP3Q9UFD9 1639 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 RTEL1-TNFRSF6BF6WH68 1400 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 MGAM2Q2M2H8 2515 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 NUMA1Q14980 2115 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 KIAA2026Q5HYC2 2103 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 DENND4BO75064 1496 aaPredicted RBP1.33□□□□□ -2.2
SMAD4-207ENST00000589076 GRIN2BQ13224 1484 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 A0A087WUU8 490 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 TRGV5A0A0B4J1U4 118 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 A0A0G2JQZ4 141 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 A0A1W2PQD3 144 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 ARRDC5A6NEK1 342 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 M0QZ92 97 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 BHLHE40O14503 412 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 SLC16A4O15374 487 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 APOMO95445 188 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 KRT75O95678 551 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 IL3P08700 152 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 MYL12AP19105 171 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 BLVRAP53004 296 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 HES1Q14469 280 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 JOSD1Q15040 202 aaPredicted RBP1.33□□□□□ -2.2
SMAD4-207ENST00000589076 HSP90B2PQ58FF3 399 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 FAM78BQ5VT40 261 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 SPATA12Q7Z6I5 190 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 TMEM161BQ8NDZ6 487 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 OR5J2Q8NH18 312 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 PIGXQ8TBF5 258 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 RNASE6Q93091 150 aaKnown RBP1.33□□□□□ -2.2
SMAD4-207ENST00000589076 CCL13Q99616 98 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 MAP1LC3AQ9H492 121 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 FGFR1OP2Q9NVK5 253 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 BABAM2Q9NXR7 383 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 USP34Q70CQ2 3546 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 KIF15Q9NS87 1388 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 OTOGQ6ZRI0 2925 aa1.33□□□□□ -2.2
SMAD4-207ENST00000589076 MALRD1Q5VYJ5 2156 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 MUC3AQ02505 3323 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 TMED7-TICAM2A0A0A6YYA0 188 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 MDFIC2A0A1B0GVS7 189 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 A0A1B0GW54 56 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 DISC1C4P0D8 188 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 C9JCJ5 164 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 H0Y980 276 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 CXCR6O00574 342 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 TXNDC9O14530 226 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 DEXIO95424 95 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 TAS2R20P59543 309 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 PRDX4Q13162 271 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 SBSNQ6UWP8 590 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms