RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CLCC1Q96S66 551 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 ATP5SQ99766 215 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 BET1LQ9NYM9 111 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 KPTNQ9Y664 436 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 DFFBO76075 338 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 RPS16P62249 146 aaKnown RBP16.07■□□□□ 0.16
TRIM47-204ENST00000587339 PAX2Q02962 417 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 PRNDQ9UKY0 176 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 AUP1Q9Y679 476 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 ARHGAP32A7KAX9 2087 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 ASH1LQ9NR48 2969 aaKnown RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 IGHV1-3A0A0C4DH29 117 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 LEUTXA8MZ59 168 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 UPK2O00526 184 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 SEC11BP0C7V7 166 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 HTR1DP28221 377 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 COMMD7Q86VX2 200 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 STPG2Q8N412 459 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 C10orf105Q8TEF2 133 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 NRGNQ92686 78 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 OR4C12Q96R67 309 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 MS4A7Q9GZW8 240 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 HIPK2Q9H2X6 1198 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 TCF19Q9Y242 345 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 IGHV3-72A0A0B4J1Y9 119 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 IGHV2-70DA0A0C4DH43 119 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 FGF16O43320 207 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 FAM157CP0CG43 387 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 SPP1P10451 314 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 HSPE1P61604 102 aaKnown RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 ARL16Q0P5N6 197 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 KLRD1Q13241 179 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 CRYBG3Q68DQ2 2970 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 OR8G2PQ6IF36 304 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 VMO1Q7Z5L0 202 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 PUSL1Q8N0Z8 303 aaKnown RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 PERPQ96FX8 193 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 TSNAXQ99598 290 aaKnown RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 UNKLQ9H9P5 680 aaKnown RBP16.06■□□□□ 0.16
TRIM47-204ENST00000587339 MMP26Q9NRE1 261 aa16.06■□□□□ 0.16
TRIM47-204ENST00000587339 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 LY6LH3BQJ8 138 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 FOXH1O75593 365 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 MOB3BQ86TA1 216 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 HAPLN4Q86UW8 402 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 LILRB2Q8N423 598 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 VSTM2AQ8TAG5 236 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 HEYLQ9NQ87 328 aaPredicted RBP16.05■□□□□ 0.16
TRIM47-204ENST00000587339 PFDN2Q9UHV9 154 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 ZNF257Q9Y2Q1 563 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 OR51B2Q9Y5P1 312 aa16.05■□□□□ 0.16
TRIM47-204ENST00000587339 KBTBD11O94819 623 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 HOXA1P49639 335 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-204ENST00000587339 HCP5Q6MZN7 132 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 SH3BGRL3Q9H299 93 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 MED9Q9NWA0 146 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 FKBP11Q9NYL4 201 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 DPM3Q9P2X0 92 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 ZNF705EA8MWA4 302 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-204ENST00000587339 IFNA5P01569 189 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 FGF2P09038 288 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 CEACAM3P40198 252 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 VDAC2P45880 294 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-204ENST00000587339 LGALS7P47929 136 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 SULT1A2P50226 295 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 RPP30P78346 268 aaKnown RBP16.04■□□□□ 0.16
TRIM47-204ENST00000587339 SLC25A24Q6NUK1 477 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 SIRPDQ9H106 197 aa16.04■□□□□ 0.16
TRIM47-204ENST00000587339 ODF3BA8MYP8 253 aa16.03■□□□□ 0.16
TRIM47-204ENST00000587339 VWC2LB2RUY7 222 aa16.03■□□□□ 0.16
TRIM47-204ENST00000587339 USF1P22415 310 aaPredicted RBP16.03■□□□□ 0.16
TRIM47-204ENST00000587339 SLC38A11Q08AI6 406 aa16.03■□□□□ 0.16
TRIM47-204ENST00000587339 TPTE2P1Q5T6R2 138 aa16.03■□□□□ 0.16
TRIM47-204ENST00000587339 OR10P1Q8NGE3 313 aa16.03■□□□□ 0.16
TRIM47-204ENST00000587339 IFNA10P01566 189 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 IGLV2-23P01705 113 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 MYOD1P15172 320 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 ATP6V0CP27449 155 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 VMA21Q3ZAQ7 101 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 LDLRAD2Q5SZI1 272 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 ENY2Q9NPA8 101 aa16.02■□□□□ 0.16
TRIM47-204ENST00000587339 IGHV4-61A0A0C4DH41 118 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 TEX46H3BTG2 121 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 TOX4O94842 621 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 COL8A1P27658 744 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 RPL8P62917 257 aaKnown RBP16.02■□□□□ 0.15
TRIM47-204ENST00000587339 ZNF787Q6DD87 383 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 OR5B3Q8NH48 314 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 OR4A5Q8NH83 315 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 PINX1Q96BK5 328 aaKnown RBP16.02■□□□□ 0.15
TRIM47-204ENST00000587339 GNPNAT1Q96EK6 184 aaPredicted RBP16.02■□□□□ 0.15
TRIM47-204ENST00000587339 HINT2Q9BX68 163 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 LPAR2Q9HBW0 351 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 PLA2G2EQ9NZK7 142 aa16.02■□□□□ 0.15
TRIM47-204ENST00000587339 A0A1W2PPI3 338 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 C15orf62A8K5M9 175 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 PMS2P5A8MQ11 134 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 FAM157AC9JC47 383 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 RNASEK-C17orf49H0YIS7 233 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 OPN1MWP04001 364 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms