RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 AIFM2Q9BRQ8 373 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 RANGRFQ9HD47 186 aaPredicted RBP15.74■□□□□ 0.11
SS18-224ENST00000584083 SAP30O75446 220 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 ZNF182P17025 639 aaPredicted RBP15.73■□□□□ 0.11
SS18-224ENST00000584083 DCTN2Q13561 401 aaKnown RBP15.73■□□□□ 0.11
SS18-224ENST00000584083 AADACL3Q5VUY0 350 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 ZNF429Q86V71 674 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 LYSMD2Q8IV50 215 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 PUSL1Q8N0Z8 303 aaKnown RBP15.73■□□□□ 0.11
SS18-224ENST00000584083 OR6F1Q8NGZ6 308 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 MOB3AQ96BX8 217 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 USMG5Q96IX5 58 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 SCPEP1Q9HB40 452 aa15.73■□□□□ 0.11
SS18-224ENST00000584083 SORL1Q92673 2214 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 RBFOX2O43251 390 aaKnown RBP eCLIP15.72■□□□□ 0.11
SS18-224ENST00000584083 LY86O95711 162 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 ZP3P21754 424 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 GNRHRP30968 328 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 HRH1P35367 487 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 MAS1LP35410 378 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 RPL27AP46776 148 aaKnown RBP15.72■□□□□ 0.11
SS18-224ENST00000584083 ALDH3B2P48448 385 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 FYTTD1Q96QD9 318 aaKnown RBP15.72■□□□□ 0.11
SS18-224ENST00000584083 HRASLSQ9HDD0 168 aa15.72■□□□□ 0.11
SS18-224ENST00000584083 DPPA5A6NC42 116 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 HMX3A6NHT5 357 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 PRH1P02810 166 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 TSPAN5P62079 268 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 RHOGP84095 191 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 SLC25A42Q86VD7 318 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 CD300LFQ8TDQ1 290 aa15.71■□□□□ 0.11
SS18-224ENST00000584083 PEF1Q9UBV8 284 aaKnown RBP15.71■□□□□ 0.11
SS18-224ENST00000584083 ZNF256Q9Y2P7 627 aaPredicted RBP15.71■□□□□ 0.11
SS18-224ENST00000584083 HPRT1P00492 218 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 RCVRNP35243 200 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 TAS2R31P59538 309 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 RPL8P62917 257 aaKnown RBP15.7■□□□□ 0.1
SS18-224ENST00000584083 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 ZNF343Q6P1L6 599 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 ACSM6Q6P461 480 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 CMTM1Q8IZ96 169 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 TTC9CQ8N5M4 171 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 OR4A5Q8NH83 315 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 OR4C12Q96R67 309 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 BET1LQ9NYM9 111 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 ADAM30Q9UKF2 790 aa15.7■□□□□ 0.1
SS18-224ENST00000584083 FAM223BA6NKX1 122 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 RBMXL2O75526 392 aaKnown RBP15.69■□□□□ 0.1
SS18-224ENST00000584083 PGLYRP1O75594 196 aaPredicted RBP15.69■□□□□ 0.1
SS18-224ENST00000584083 RLN1P04808 185 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 NQO2P16083 231 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 HLA-GP17693 338 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 ATP5G2Q06055 141 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 CD69Q07108 199 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 RNASE12Q5GAN4 147 aaKnown RBP15.69■□□□□ 0.1
SS18-224ENST00000584083 FAM223AQ8IWN6 122 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 DMBX1Q8NFW5 382 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 ELOVL1Q9BW60 279 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 FXYD6Q9H0Q3 95 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 AKIP1Q9NQ31 210 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 EXTL2Q9UBQ6 330 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 ZNF257Q9Y2Q1 563 aa15.69■□□□□ 0.1
SS18-224ENST00000584083 TEX22C9J3V5 150 aa15.68■□□□□ 0.1
SS18-224ENST00000584083 S1PR2O95136 353 aa15.68■□□□□ 0.1
SS18-224ENST00000584083 IL6RP08887 468 aaPredicted RBP15.68■□□□□ 0.1
SS18-224ENST00000584083 MYOD1P15172 320 aa15.68■□□□□ 0.1
SS18-224ENST00000584083 ZNF45Q02386 682 aa15.68■□□□□ 0.1
SS18-224ENST00000584083 CLVS1Q8IUQ0 354 aaPredicted RBP15.68■□□□□ 0.1
SS18-224ENST00000584083 SLC2A9Q9NRM0 540 aa15.68■□□□□ 0.1
SS18-224ENST00000584083 E7EUB6 86 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 GPR31O00270 319 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 OR2J3O76001 311 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 TRBV12-3P01733 135 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 ZNF735P0CB33 412 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 RPA2P15927 270 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 ERVK-16P61578 105 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
SS18-224ENST00000584083 POU2AF1Q16633 256 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 NECAP1Q8NC96 275 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 OR6Q1Q8NGQ2 317 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 B9D2Q9BPU9 175 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 RSRP1Q9BUV0 290 aa15.67■□□□□ 0.1
SS18-224ENST00000584083 TRBV9A0A0B4J1U6 114 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 UPK2O00526 184 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 RGS5O15539 181 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 F2RP25116 425 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 S100GP29377 79 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 SYNJ2BPP57105 145 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 KLF5Q13887 457 aaPredicted RBP15.66■□□□□ 0.1
SS18-224ENST00000584083 SPCS2Q15005 226 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 PHLDA2Q53GA4 152 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 LPCAT3Q6P1A2 487 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 DGCR14Q96DF8 476 aaKnown RBP15.66■□□□□ 0.1
SS18-224ENST00000584083 TMEM140Q9NV12 185 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 COMMD9Q9P000 198 aa15.66■□□□□ 0.1
SS18-224ENST00000584083 LSM4Q9Y4Z0 139 aaKnown RBP15.66■□□□□ 0.1
SS18-224ENST00000584083 TRAV3A0A0B4J244 114 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 A0A1B0GW64 132 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 NPIPB5A8MRT5 1133 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms