RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZNF702PQ9H963 129 aa6.63□□□□□ -1.35
ERBB2-216ENST00000584014 SLC2A9Q9NRM0 540 aa6.63□□□□□ -1.35
ERBB2-216ENST00000584014 TPSG1Q9NRR2 321 aa6.63□□□□□ -1.35
ERBB2-216ENST00000584014 PLSCR3Q9NRY6 295 aa6.63□□□□□ -1.35
ERBB2-216ENST00000584014 LIN7CQ9NUP9 197 aaKnown RBP6.63□□□□□ -1.35
ERBB2-216ENST00000584014 WSB1Q9Y6I7 421 aa6.63□□□□□ -1.35
ERBB2-216ENST00000584014 C3orf85A0A1B0GTC6 90 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 TMEM89A2RUT3 159 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 NAP1L6A6NFF2 107 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 SRRM4A7MD48 611 aaKnown RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 FGF16O43320 207 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 ACTL6BO94805 426 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 NDUFA7O95182 113 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 CA2P00918 260 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 HRASP01112 189 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 KRASP01116 189 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 CTSDP07339 412 aaPredicted RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 APELAP0DMC3 54 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 F2RP25116 425 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 G6PCP35575 357 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 ECI1P42126 302 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 LGALS7P47929 136 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 RPL15P61313 204 aaKnown RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 SRSF4Q08170 494 aaKnown RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 PJVKQ0ZLH3 352 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 EIF4EBP1Q13541 118 aaPredicted RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 MSMO1Q15800 293 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 TNXAQ16473 311 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 ECSCRQ19T08 205 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 TMEM177Q53S58 311 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 LINC00299Q6ZSB3 139 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 STX12Q86Y82 276 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 FOXRED2Q8IWF2 684 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 SGPP2Q8IWX5 399 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 KLHDC1Q8N7A1 406 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 NPBQ8NG41 125 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 OSR1Q8TAX0 266 aaPredicted RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 DDB2Q92466 427 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 MRGPRFQ96AM1 343 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 R3HDM4Q96D70 268 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 TSC22D3Q99576 134 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 PHB2Q99623 299 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 RTBDNQ9BSG5 229 aaPredicted RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 FAM103A1Q9BTL3 118 aaKnown RBP6.62□□□□□ -1.35
ERBB2-216ENST00000584014 CCDC32Q9BV29 185 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 VSIG4Q9Y279 399 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 ATRQ13535 2644 aa6.62□□□□□ -1.35
ERBB2-216ENST00000584014 LYRM1O43325 122 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
ERBB2-216ENST00000584014 HPRT1P00492 218 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
ERBB2-216ENST00000584014 VDAC1P21796 283 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 CAMLGP49069 296 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 AKR1C2P52895 323 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 ATP5IP56385 69 aaPredicted RBP6.61□□□□□ -1.35
ERBB2-216ENST00000584014 BRWD1-AS2P59051 145 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 FXYD3Q14802 87 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 ZNF329Q86UD4 541 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 PPP1R27Q86WC6 154 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 FAM71E2Q8N5Q1 922 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 CD300LFQ8TDQ1 290 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 CASTOR1Q8WTX7 329 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 RNF125Q96EQ8 232 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 ZNF486Q96H40 463 aaPredicted RBP6.61□□□□□ -1.35
ERBB2-216ENST00000584014 FYTTD1Q96QD9 318 aaKnown RBP6.61□□□□□ -1.35
ERBB2-216ENST00000584014 TP53RKQ96S44 253 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 RNF5Q99942 180 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 HINT2Q9BX68 163 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 C5orf66Q9H5L9 145 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 GPR132Q9UNW8 380 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 FLVCR2Q9UPI3 526 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 KCNIP3Q9Y2W7 256 aa6.61□□□□□ -1.35
ERBB2-216ENST00000584014 A0A1B0GUS0 222 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 FAM240BA0A1B0GVZ2 78 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 PSMB11A5LHX3 300 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 AP4M1O00189 453 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 EREGO14944 169 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 ARPC1BO15143 372 aaKnown RBP6.6□□□□□ -1.35
ERBB2-216ENST00000584014 ATP6V0E1O15342 81 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 PLA2G10O15496 165 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 KCNAB3O43448 404 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 CLN5O75503 358 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 UPK1BO75841 260 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 SNAPC5O75971 98 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 OR2A4O95047 310 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 NDUFA3O95167 84 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 SPDEFO95238 335 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 IGLV2-23P01705 113 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 OR5AC1P0C628 307 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 NQO2P16083 231 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 RAB25P57735 213 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 UBE2KP61086 200 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 SLC35B1P78383 322 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 CX3CL1P78423 397 aa6.6□□□□□ -1.35
ERBB2-216ENST00000584014 RBMS2Q15434 407 aaKnown RBP6.6□□□□□ -1.35
ERBB2-216ENST00000584014 SURF2Q15527 256 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms