RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NDUFA3O95167 84 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 LY86O95711 162 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 NHLRC4P0CG21 123 aaPredicted RBP12.15□□□□□ -0.46
SKA2-209ENST00000583976 PI3P19957 117 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 INPP1P49441 399 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 UCP3P55916 312 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 GNB1P62873 340 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 ZNF45Q02386 682 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 CATR1Q13166 79 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
SKA2-209ENST00000583976 C5orf64Q2M2E5 130 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 LIN54Q6MZP7 749 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 CMTM1Q8IZ96 169 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 OR11H1Q8NG94 326 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
SKA2-209ENST00000583976 SDHCQ99643 169 aaPredicted RBP12.15□□□□□ -0.46
SKA2-209ENST00000583976 RSRP1Q9BUV0 290 aa12.15□□□□□ -0.46
SKA2-209ENST00000583976 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
SKA2-209ENST00000583976 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
SKA2-209ENST00000583976 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 LGALS7P47929 136 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 AP3S2P59780 193 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 TRIQKQ629K1 86 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 SLC38A6Q8IZM9 456 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 SPAG16Q8N0X2 631 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 MARCH1Q8TCQ1 289 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 GON7Q9BXV9 100 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 HRASLSQ9HDD0 168 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 TPSG1Q9NRR2 321 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
SKA2-209ENST00000583976 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
SKA2-209ENST00000583976 FCN1O00602 326 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 IGF1P05019 195 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 S100GP29377 79 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 FAUP35544 74 aaKnown RBP12.13□□□□□ -0.47
SKA2-209ENST00000583976 NDPQ00604 133 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
SKA2-209ENST00000583976 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 OR13C8Q8NGS7 320 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 OR4S2Q8NH73 311 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
SKA2-209ENST00000583976 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
SKA2-209ENST00000583976 TENM2Q9NT68 2774 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 KIR2DS2P43631 304 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 POC5Q8NA72 575 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
SKA2-209ENST00000583976 ZFAND1Q8TCF1 268 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 PRRT1Q99946 306 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 SLC2A9Q9NRM0 540 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 SCP2D1Q9UJQ7 156 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 LYSTQ99698 3801 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
SKA2-209ENST00000583976 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 I3L521 148 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 SPDEFO95238 335 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 HLA-DRB1P01911 266 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 IL7P13232 177 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
SKA2-209ENST00000583976 PIGPP57054 158 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 LINC00299Q6ZSB3 139 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
SKA2-209ENST00000583976 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
SKA2-209ENST00000583976 CA2P00918 260 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 CRYGBP07316 175 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 OR8U8P0C7N1 319 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
SKA2-209ENST00000583976 RPA2P15927 270 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 F2RP25116 425 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 LPAR6P43657 344 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 SLURP1P55000 103 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 UBE2KP61086 200 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 CX3CL1P78423 397 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 S100ZQ8WXG8 99 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 ZNF486Q96H40 463 aaPredicted RBP12.1□□□□□ -0.47
SKA2-209ENST00000583976 OR51J1Q9H342 316 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 SLC2A8Q9NY64 477 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 COPZ2Q9P299 210 aa12.1□□□□□ -0.47
SKA2-209ENST00000583976 C14orf166Q9Y224 244 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms