RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 AKR1C8PQ5T2L2 129 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 ZNF833PQ6ZTB9 187 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 MOB3BQ86TA1 216 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 ZNF383Q8NA42 475 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 OR10P1Q8NGE3 313 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 OR2G3Q8NGZ4 309 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 VSTM2AQ8TAG5 236 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 OSR1Q8TAX0 266 aaPredicted RBP7.59□□□□□ -1.19
SS18-220ENST00000582092 IGFBPL1Q8WX77 278 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 MARC2Q969Z3 335 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 PINX1Q96BK5 328 aaKnown RBP7.59□□□□□ -1.19
SS18-220ENST00000582092 CXorf58Q96LI9 332 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 GINS3Q9BRX5 216 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 HINT2Q9BX68 163 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 QTRT1Q9BXR0 403 aaKnown RBP7.59□□□□□ -1.19
SS18-220ENST00000582092 TMEM140Q9NV12 185 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 WASHC3Q9Y3C0 194 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 ANKRD34BA5PLL1 514 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 UMAD1C9J7I0 102 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 TSPAN15O95858 294 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 CT45A6P0DMU7 189 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 CT45A5P0DMU8 189 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 CT45A7P0DMV0 189 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 COX7A1P24310 79 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 SULT1A2P50226 295 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 PAX9P55771 341 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 OR2B8PP59922 312 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 AANATQ16613 207 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 VMA21Q3ZAQ7 101 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 CLEC2AQ6UVW9 174 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 ZNF841Q6ZN19 808 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 PDPNQ86YL7 162 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
SS18-220ENST00000582092 ODF3L1Q8IXM7 274 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 VKORC1L1Q8N0U8 176 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 ZNF709Q8N972 641 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 OR4C13Q8NGP0 309 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 OR52E5Q8NH55 327 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 DDB2Q92466 427 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 RPEQ96AT9 228 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 HARBI1Q96MB7 349 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 PCGF1Q9BSM1 259 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 MRPL20Q9BYC9 149 aaKnown RBP7.58□□□□□ -1.2
SS18-220ENST00000582092 HRH4Q9H3N8 390 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 C11orf1Q9H5F2 150 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 WFDC1Q9HC57 220 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 INSIG2Q9Y5U4 225 aa7.58□□□□□ -1.2
SS18-220ENST00000582092 FLNAP21333 2647 aaKnown RBP7.58□□□□□ -1.2
SS18-220ENST00000582092 A0A087X0M5 115 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 IGHV2-26A0A0B4J1V2 119 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 A0A1B0GX30 115 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 TRIM77I1YAP6 450 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 M0R1W7 72 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 SMAD7O15105 426 aaKnown RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 FGF16O43320 207 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 PROP1O75360 226 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 IFNA4P05014 189 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 ARG1P05089 322 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 OR9G9P0C7N8 305 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 REG1BP48304 166 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 F2RL1P55085 397 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 DLX6P56179 175 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 LGALS4P56470 323 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 BRWD1-AS2P59051 145 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 ARF6P62330 175 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 SLC38A11Q08AI6 406 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 ZNF616Q08AN1 781 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 OR4A47Q6IF82 309 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 TMEM182Q6ZP80 229 aaPredicted RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 HSD17B13Q7Z5P4 300 aaPredicted RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 PNKDQ8N490 385 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 C8orf46Q8TAG6 207 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 BSCL2Q96G97 398 aaPredicted RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 NARS2Q96I59 477 aaKnown RBP7.57□□□□□ -1.2
SS18-220ENST00000582092 ZNF251Q9BRH9 671 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 COMMD5Q9GZQ3 224 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 PLEKHA3Q9HB20 300 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 AUP1Q9Y679 476 aa7.57□□□□□ -1.2
SS18-220ENST00000582092 CELSR1Q9NYQ6 3014 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 SMCO3A2RU48 225 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 C15orf61A6NNL5 157 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 KIAA1324LA8MWY0 1029 aaPredicted RBP7.56□□□□□ -1.2
SS18-220ENST00000582092 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 UPK2O00526 184 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 ACTL6BO94805 426 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 KBTBD11O94819 623 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 TMEM50AO95807 157 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 P0C879 139 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 SPP1P10451 314 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 USF1P22415 310 aaPredicted RBP7.56□□□□□ -1.2
SS18-220ENST00000582092 SNCAP37840 140 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 LGALS7P47929 136 aa7.56□□□□□ -1.2
SS18-220ENST00000582092 ERHP84090 104 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms