RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 ZNF891A8MT65 544 aaPredicted RBP11.35□□□□□ -0.59
RNF43-205ENST00000581868 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 CD59P13987 128 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 CCKARP32238 428 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 OPRK1P41145 380 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 HTD2P86397 168 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 RAB1CQ92928 201 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 LEAP2Q969E1 77 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 GGTLC1Q9BX51 225 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 CLCF1Q9UBD9 225 aa11.35□□□□□ -0.59
RNF43-205ENST00000581868 CD99P14209 185 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 ZNF134P52741 427 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 ZNF718Q3SXZ3 478 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 OCC1Q8TAD7 63 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 FKBP11Q9NYL4 201 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 ELOVL5Q9NYP7 299 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 HCFC1P51610 2035 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 GFRA3O60609 400 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
RNF43-205ENST00000581868 FOXL1Q12952 345 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 UTF1Q5T230 341 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 HES3Q5TGS1 186 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 C2orf88Q9BSF0 95 aa11.34□□□□□ -0.59
RNF43-205ENST00000581868 MPDU1O75352 247 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 CXorf1O96002 111 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 ADMP35318 185 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
RNF43-205ENST00000581868 RELBQ01201 579 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 SPATA31B1PQ5VZV4 182 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 S1PR3Q99500 378 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 TMEM140Q9NV12 185 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
RNF43-205ENST00000581868 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 TNFSF10P50591 281 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 TEX38Q6PEX7 206 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 C9orf106Q8NAJ2 232 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 IMMP2LQ96T52 175 aa11.33□□□□□ -0.6
RNF43-205ENST00000581868 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
RNF43-205ENST00000581868 SLC17A3O00476 420 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 FOXH1O75593 365 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 CD33P20138 364 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 CCL11P51671 97 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 C1orf229Q6ZS94 237 aaPredicted RBP11.32□□□□□ -0.6
RNF43-205ENST00000581868 HINT2Q9BX68 163 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 TCF19Q9Y242 345 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 ASPMQ8IZT6 3477 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 EREGO14944 169 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
RNF43-205ENST00000581868 ZNF90Q03938 601 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 HLA-DRB5Q30154 266 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 TRAT1Q6PIZ9 186 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 LRP11Q86VZ4 500 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
RNF43-205ENST00000581868 HEATR1Q9H583 2144 aaKnown RBP11.32□□□□□ -0.6
RNF43-205ENST00000581868 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 CBLN1P23435 193 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 TIMP3P35625 211 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 RPL31P62899 125 aaKnown RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 JPT1Q9UK76 154 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 PTPRBP23467 1997 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 CDX4O14627 284 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 MYOD1P15172 320 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 GCHFRP30047 84 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
RNF43-205ENST00000581868 BEND2Q8NDZ0 799 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
RNF43-205ENST00000581868 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
RNF43-205ENST00000581868 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 YPEL1O60688 119 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 ACTL6BO94805 426 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 SELLP14151 372 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 LOXL3P58215 753 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 TRIP6Q15654 476 aaKnown RBP11.3□□□□□ -0.6
RNF43-205ENST00000581868 EFNB3Q15768 340 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 LBHQ53QV2 105 aaPredicted RBP11.3□□□□□ -0.6
RNF43-205ENST00000581868 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
RNF43-205ENST00000581868 OR52E5Q8NH55 327 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms