RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 C11orf68Q9H3H3 251 aaKnown RBP9.37□□□□□ -0.91
SS18-219ENST00000581570 TRBV6-7A0A0A0MS04 114 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 FOXI3A8MTJ6 420 aaPredicted RBP9.36□□□□□ -0.91
SS18-219ENST00000581570 E7EUB6 86 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 S1PR2O95136 353 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 DHFRP00374 187 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 CRYGCP07315 174 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 MYOD1P15172 320 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 HIST1H1BP16401 226 aaKnown RBP9.36□□□□□ -0.91
SS18-219ENST00000581570 PSMB6P28072 239 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
SS18-219ENST00000581570 MFAP2P55001 183 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 LAMTOR1Q6IAA8 161 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 ZNF555Q8NEP9 628 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 OR6M1Q8NGM8 313 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 CABLES2Q9BTV7 478 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 C6orf62Q9GZU0 229 aaPredicted RBP9.36□□□□□ -0.91
SS18-219ENST00000581570 OR51E2Q9H255 320 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 SLC2A9Q9NRM0 540 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
SS18-219ENST00000581570 EFCAB10A6NFE3 127 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 FCGR3BO75015 233 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 AREGP15514 252 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 MRPS15P82914 257 aaKnown RBP9.35□□□□□ -0.91
SS18-219ENST00000581570 P2RY14Q15391 338 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 OR11H2Q8NH07 326 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 CD300LFQ8TDQ1 290 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
SS18-219ENST00000581570 MFSD2BA6NFX1 497 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 OR4C46A6NHA9 309 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 DEFB4AO15263 64 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 CD37P11049 281 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 DEFA4P12838 97 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 GPR183P32249 361 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 ST3GAL4Q11206 333 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 PLAC9Q5JTB6 97 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 ZFP1Q6P2D0 407 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 PLET1Q6UQ28 207 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 APRG1Q8IVJ8 170 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 VKORC1L1Q8N0U8 176 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 GINS4Q9BRT9 223 aa9.34□□□□□ -0.91
SS18-219ENST00000581570 IGLV11-55A0A075B6I3 123 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 A0A1B0GW64 132 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 C11orf94C9JXX5 98 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 ATP5HO75947 161 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 DIRAS3O95661 229 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 REG1AP05451 166 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 RPA2P15927 270 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 MAS1LP35410 378 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 PSMD7P51665 324 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 WNT4P56705 351 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 ARFRP1Q13795 201 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 MS4A15Q8N5U1 240 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 VSTM2AQ8TAG5 236 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 OR2A7Q96R45 310 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
SS18-219ENST00000581570 PLGRKTQ9HBL7 147 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 PRELID3BQ9Y3B1 194 aa9.33□□□□□ -0.92
SS18-219ENST00000581570 MUC4Q99102 2169 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 J3QRK9 145 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 MYL12BO14950 172 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 KBTBD11O94819 623 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 CDK1P06493 297 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 CTSDP07339 412 aaPredicted RBP9.32□□□□□ -0.92
SS18-219ENST00000581570 FCGR3AP08637 254 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 ADMP35318 185 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 ZNF124Q15973 351 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 HSD17B12Q53GQ0 312 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 OR2B11Q5JQS5 317 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
SS18-219ENST00000581570 OR56B1Q8NGI3 324 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 TMEM167AQ8TBQ9 72 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 MAFIPQ8WZ33 124 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
SS18-219ENST00000581570 MRPS7Q9Y2R9 242 aaKnown RBP9.32□□□□□ -0.92
SS18-219ENST00000581570 RAB27BO00194 218 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 SLC17A2O00624 439 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 RTL8CO15255 209 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 CRHBPP24387 322 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
SS18-219ENST00000581570 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
SS18-219ENST00000581570 KCTD9Q7L273 389 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 H1FOOQ8IZA3 346 aaPredicted RBP9.31□□□□□ -0.92
SS18-219ENST00000581570 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
SS18-219ENST00000581570 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
SS18-219ENST00000581570 KCNK7Q9Y2U2 307 aa9.31□□□□□ -0.92
SS18-219ENST00000581570 TGOLN2O43493 480 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms