RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 IGKV1D-39P04432 117 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 P0C879 139 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 ANXA7P20073 488 aaKnown RBP8.26□□□□□ -1.09
CCDC47-203ENST00000580986 VAMP1P23763 118 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 MAS1LP35410 378 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 LPAR6P43657 344 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 HNF4GQ14541 408 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 OXA1LQ15070 435 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM167AQ8TBQ9 72 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 MITD1Q8WV92 249 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
CCDC47-203ENST00000580986 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 RITA1Q96K30 269 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 OR2A7Q96R45 310 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 RASL11BQ9BPW5 248 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 PRSS22Q9GZN4 317 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 METTL1Q9UBP6 276 aaKnown RBP8.26□□□□□ -1.09
CCDC47-203ENST00000580986 INMT-MINDY4F8WBC2 141 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 SLC25A17O43808 307 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 IGHG2P01859 326 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 CRYBA1P05813 215 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 SLC25A6P12236 298 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 VDAC1P21796 283 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 CNTFRP26992 372 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 CRIP2P52943 208 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-203ENST00000580986 TRIM16LQ309B1 348 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 SP6Q3SY56 376 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 AARDQ4LEZ3 155 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 C4orf46Q504U0 113 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 OR4A47Q6IF82 309 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 LIN54Q6MZP7 749 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF695Q8IW36 515 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 FOXRED2Q8IWF2 684 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 MMD2Q8IY49 270 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 DMBX1Q8NFW5 382 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 LHFPL5Q8TAF8 219 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF431Q8TF32 576 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-203ENST00000580986 CHPT1Q8WUD6 406 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 PHB2Q99623 299 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 FBXL15Q9H469 300 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 GPN1Q9HCN4 374 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM140Q9NV12 185 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 COA4Q9NYJ1 87 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 TMED3Q9Y3Q3 217 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 MMP24Q9Y5R2 645 aa8.25□□□□□ -1.09
CCDC47-203ENST00000580986 A0A1B0GUS0 222 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 C7orf66A4D0T2 115 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 DBX1A6NMT0 343 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 KRASP01116 189 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 IGF1P05019 195 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 AKR1C2P52895 323 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 RAB25P57735 213 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 RPL8P62917 257 aaKnown RBP8.24□□□□□ -1.09
CCDC47-203ENST00000580986 PLGLAQ15195 96 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 PRSS8Q16651 343 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 MRGPRG-AS1Q2M3A8 158 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 NMSQ5H8A3 153 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM268Q5VZI3 342 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 THOC7Q6I9Y2 204 aaKnown RBP8.24□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF429Q86V71 674 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 SELENOHQ8IZQ5 122 aaKnown RBP8.24□□□□□ -1.09
CCDC47-203ENST00000580986 RRNAD1Q96FB5 475 aaKnown RBP8.24□□□□□ -1.09
CCDC47-203ENST00000580986 DUX5Q96PT3 197 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 SRSF8Q9BRL6 282 aaKnown RBP8.24□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF702PQ9H963 129 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 FKBP11Q9NYL4 201 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF257Q9Y2Q1 563 aa8.24□□□□□ -1.09
CCDC47-203ENST00000580986 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 C15orf61A6NNL5 157 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 UPK2O00526 184 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 HKR1P10072 659 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 G6PCP35575 357 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 BLCAPP62952 87 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 ANKRD55Q3KP44 614 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 PDLIM3Q53GG5 364 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-203ENST00000580986 Q6ZSV7 163 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 H2BFWTQ7Z2G1 175 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 PRIMA1Q86XR5 153 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 VKORC1L1Q8N0U8 176 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 SLC35G3Q8N808 338 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 OR4F5Q8NH21 305 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 OR5B3Q8NH48 314 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM68Q96MH6 324 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 ZNF430Q9H8G1 570 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-203ENST00000580986 TPSG1Q9NRR2 321 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 TNFRSF19Q9NS68 423 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 PRNDQ9UKY0 176 aa8.23□□□□□ -1.09
CCDC47-203ENST00000580986 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-203ENST00000580986 SETD2Q9BYW2 2564 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-203ENST00000580986 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 A0A1B0GU03 582 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 AP4M1O00189 453 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 SNAPC5O75971 98 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 ACTL6BO94805 426 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms