RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NEURL2Q9BR09 285 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 ZNF436Q9C0F3 470 aaPredicted RBP12.37□□□□□ -0.43
SS18-216ENST00000580751 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 STAB1Q9NY15 2570 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
SS18-216ENST00000580751 GOSR2O14653 212 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 FCGR3BO75015 233 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 TSPAN9O75954 239 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 HRASP01112 189 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 FGF2P09038 288 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 NQO2P16083 231 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 LGALS7P47929 136 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 RAP2BP61225 183 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 RELBQ01201 579 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 FOXL1Q12952 345 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 TCTE3Q8IZS6 198 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 LHFPL5Q8TAF8 219 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 NMES1Q9C002 83 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 PRSS22Q9GZN4 317 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 MMP24Q9Y5R2 645 aa12.36□□□□□ -0.43
SS18-216ENST00000580751 A0A1B0GU03 582 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 TMEM89A2RUT3 159 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 RAMP3O60896 148 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 CXCL3P19876 107 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 LINC00205P59089 165 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 ERVK-16P61578 105 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 MMDQ15546 238 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 NMSQ5H8A3 153 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 GGNBP1Q5YKI7 109 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 Q6ZSV7 163 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
SS18-216ENST00000580751 C2orf50Q96LR7 162 aa12.35□□□□□ -0.43
SS18-216ENST00000580751 TENM1Q9UKZ4 2725 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 C5orf51A6NDU8 294 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 NBR2O15453 112 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 SNAPC5O75971 98 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 IGKV1-16P04430 117 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 HOXB5P09067 269 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 AKR1C2P52895 323 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 H2BFSP57053 126 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 FGL1Q08830 312 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 VSTM2AQ8TAG5 236 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 TSNAXQ99598 290 aaKnown RBP12.34□□□□□ -0.43
SS18-216ENST00000580751 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 C16orf95Q9H693 158 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 PLSCR3Q9NRY6 295 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
SS18-216ENST00000580751 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 ADAP1O75689 374 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 S1PR2O95136 353 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 SPDEFO95238 335 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 CRYZL1O95825 349 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 AMY1AP04745 511 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 P0C879 139 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 BLCAPP62952 87 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
SS18-216ENST00000580751 Q8N2B8 174 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 Q8N9W7 124 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 NPBQ8NG41 125 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 OR4A5Q8NH83 315 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 TAF15Q92804 592 aaKnown RBP eCLIP12.33□□□□□ -0.44
SS18-216ENST00000580751 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 RASL11BQ9BPW5 248 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 PRR13Q9NZ81 148 aa12.33□□□□□ -0.44
SS18-216ENST00000580751 C13orf42A0A1B0GVH6 325 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 NDUFA3O95167 84 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 IGKV1-5P01602 117 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
SS18-216ENST00000580751 F2RL1P55085 397 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 RPS16P62249 146 aaKnown RBP12.32□□□□□ -0.44
SS18-216ENST00000580751 CD83Q01151 205 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 IL15RAQ13261 267 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 SMCO1Q147U7 214 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 C2orf68Q2NKX9 166 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 IAH1Q2TAA2 248 aaPredicted RBP12.32□□□□□ -0.44
SS18-216ENST00000580751 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
SS18-216ENST00000580751 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 H2BFWTQ7Z2G1 175 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 FAM71E2Q8N5Q1 922 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
SS18-216ENST00000580751 RITA1Q96K30 269 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 RHOVQ96L33 236 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
SS18-216ENST00000580751 FAM25EA8MYX2 175 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms