RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HOXA5P20719 270 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPL23AP62750 156 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 KIAA0141Q14154 515 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SP5Q6BEB4 398 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 HEPN1Q6WQI6 88 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 STX12Q86Y82 276 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 H1FXQ92522 213 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PPP1R14DQ9NXH3 145 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PSG11Q9UQ72 335 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DOPEY2Q9Y3R5 2298 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RNF212BA8MTL3 300 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DVL1O14640 695 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SPINT2O43291 252 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PITX3O75364 302 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 OR2C1O95371 312 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GPX4P36969 197 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LINC00205P59089 165 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF295-AS1Q8N0V1 137 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PUS1Q9Y606 427 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PIGBOS1A0A0B4J2F0 54 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PAX9P55771 341 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DLX1P56177 255 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPS16P62249 146 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GNG12Q9UBI6 72 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CCL3L1P16619 93 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 G6PCP35575 357 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPL30P62888 115 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 Q3ZCU0 254 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SYNGR2O43760 224 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LY86O95711 162 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CDX1P47902 265 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PCP4P48539 62 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C17orf58Q2M2W7 97 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LSM10Q969L4 123 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNRD1Q9P1U0 126 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ARHGAP32A7KAX9 2087 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 NKX6-3A6NJ46 265 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 METTL15P1P0C7V9 234 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DEFA6Q01524 100 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CATR1Q13166 79 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RSG1Q9BU20 258 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 FAM234AQ9H0X4 552 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PSENENQ9NZ42 101 aa10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-217ENST00000580287 MMP9P14780 707 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 NDUFA6P56556 154 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPL31P62899 125 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 BAXQ07812 192 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF525Q8N782 197 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LURAP1Q96LR2 239 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 VSIRQ9H7M9 311 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CALYQ9NYX4 217 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 MMP24Q9Y5R2 645 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF727A8MUV8 499 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C17orf98A8MV24 154 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 NDUFB3O43676 98 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 S1PR2O95136 353 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CGB3P0DN86 165 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CGB7P0DN87 165 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF134P52741 427 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ARL16Q0P5N6 197 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 TMEM200BQ69YZ2 307 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SPSB3Q6PJ21 355 aa10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SLC25A6P12236 298 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PLA2G2AP14555 144 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GZMHP20718 246 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 S100A2P29034 98 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SOHLH1Q5JUK2 328 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ATP5SQ99766 215 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DOK5Q9P104 306 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 KIAA1324LA8MWY0 1029 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SLC31A2O15432 143 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 IFNA5P01569 189 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LOXL3P58215 753 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF124Q15973 351 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LRRC10Q5BKY1 277 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PRAMEF5Q5TYX0 476 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RHOVQ96L33 236 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GAR1Q9NY12 217 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 OR6C3Q9NZP0 311 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 WSB1Q9Y6I7 421 aa10.4□□□□□ -0.74
CDK5RAP3-217ENST00000580287 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms