RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 ST6GALNAC3Q8NDV1 305 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR4F17Q8NGA8 305 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 IGLV3-19P01714 112 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 GPX4P36969 197 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 CENPWQ5EE01 88 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 RNF7Q9UBF6 113 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 PKDREJQ9NTG1 2253 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 IGHV3-72A0A0B4J1Y9 119 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 LYL1P12980 280 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 CRYGSP22914 178 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZNRF1Q8ND25 227 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 DENND4CQ5VZ89 1909 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 CGAP01215 116 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 MT-ND6P03923 174 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 UMODP07911 640 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 STARD6P59095 220 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 IMMP1LQ96LU5 166 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 TXNDC17Q9BRA2 123 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 AAMDCQ9H7C9 122 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 PLXNA4Q9HCM2 1894 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 ABCA1O95477 2261 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 TRAV24A0A0B4J272 114 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 PCP4P48539 62 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 RBPJQ06330 500 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 ABLIM2Q6H8Q1 611 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 SPSB4Q96A44 273 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 ISLRO14498 428 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 FAM214BQ7L5A3 538 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR1L8Q8NGR8 309 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 RPEQ96AT9 228 aa11.49□□□□□ -0.57
TRAPPC8-207ENST00000580104 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 K7ESF4 209 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 COX5BP10606 129 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 HCP5Q6MZN7 132 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 GTF2H5Q6ZYL4 71 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 C14orf144Q96I85 54 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 LCN2P80188 198 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 C1QL4Q86Z23 238 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 NDFIP1Q9BT67 221 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 OPN3Q9H1Y3 402 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 CEACAM18A8MTB9 384 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZCCHC14Q8WYQ9 949 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 C1orf147Q96MC9 270 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 YTHDF2Q9Y5A9 579 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 CELA3BP08861 270 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 FAM87AP0C7U9 286 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 CFPP27918 469 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 TMEM170AQ8WVE7 144 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 ITLN1Q8WWA0 313 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 PI4KAP42356 2102 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 PLXNA2O75051 1894 aa11.48□□□□□ -0.57
TRAPPC8-207ENST00000580104 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 SERF1AO75920 110 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR13A1Q8NGR1 328 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 MS4A5Q9H3V2 200 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 SEBOXQ9HB31 216 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 ASCL3Q9NQ33 180 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 C21orf140B9A014 251 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 CD33P20138 364 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 KRTCAP3Q53RY4 240 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 CALYQ9NYX4 217 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 B4E171 279 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 TSPAN7P41732 249 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 VWA1Q6PCB0 445 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 LIME1Q9H400 295 aa11.47□□□□□ -0.57
TRAPPC8-207ENST00000580104 IGLV3-32A0A0A0MS00 114 aa11.46□□□□□ -0.57
TRAPPC8-207ENST00000580104 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
TRAPPC8-207ENST00000580104 PGPA6NDG6 321 aa11.46□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZNF716A6NP11 495 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms