RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 PECRQ9BY49 303 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 TRBV6-7A0A0A0MS04 114 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 MAS1LP35410 378 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 PRSS8Q16651 343 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 NECAP1Q8NC96 275 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 NEU1Q99519 415 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 PHB2Q99623 299 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 SPIN2AQ99865 258 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 SPIN2BQ9BPZ2 258 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 NICN1Q9BSH3 213 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 COA4Q9NYJ1 87 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 ZNF257Q9Y2Q1 563 aa8.51□□□□□ -1.05
SMARCE1-214ENST00000578112 TRAV25A0A0B4J276 109 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 FABP7O15540 132 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 SCTP09683 121 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 CD81P60033 236 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 CDK10Q15131 360 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 RAB11BQ15907 218 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 MMD2Q8IY49 270 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 DDB2Q92466 427 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 PARP12Q9H0J9 701 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 SDHAF2Q9NX18 166 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 NDUFB8O95169 186 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 CD3GP09693 182 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 KIR2DS2P43631 304 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 EXOSC2Q13868 293 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 CEACAM19Q7Z692 300 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 OR10J5Q8NHC4 309 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 UFD1Q92890 307 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 RAB22AQ9UL26 194 aa8.5□□□□□ -1.05
SMARCE1-214ENST00000578112 SOCS1O15524 211 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 GGCTO75223 188 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 MBP02144 154 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 RAB6AP20340 208 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 SPHARQ15513 63 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 OR4A47Q6IF82 309 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 OR10K2Q6IF99 312 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 AHSA2Q719I0 299 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 C5orf24Q7Z6I8 188 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 HAPLN4Q86UW8 402 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 VSTM2AQ8TAG5 236 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 LSM2Q9Y333 95 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 IGKV1-6A0A0C4DH72 117 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 ZNF785A8K8V0 405 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 NPIPB5A8MRT5 1133 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 A8MWP6 167 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 CTXN2P0C2S0 81 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 OR4E1P0C645 316 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 MEOX2P50222 304 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 TMEM50BP56557 158 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 MSMO1Q15800 293 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 OR2D2Q9H210 308 aa8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 ZNF230Q9UIE0 474 aaPredicted RBP8.49□□□□□ -1.05
SMARCE1-214ENST00000578112 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 NUPR2A6NF83 97 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 BMPR1BO00238 502 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 FGF2P09038 288 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 GADD45AP24522 165 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 PSMB6P28072 239 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 TAS2R60P59551 318 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 RHOGP84095 191 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 LAIR2Q6ISS4 152 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 RBMXL1Q96E39 390 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 IFT46Q9NQC8 304 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 SCN3BQ9NY72 215 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 STAB2Q8WWQ8 2551 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 MSGN1A6NI15 193 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 PDCD5O14737 125 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 MPPED1O15442 326 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 DUTP33316 252 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 FLI1Q01543 452 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 ARFRP1Q13795 201 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 IRF3Q14653 427 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 PARD6GQ9BYG4 376 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 SAV1Q9H4B6 383 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 SRD5A3Q9H8P0 318 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 AKIP1Q9NQ31 210 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 ALMS1Q8TCU4 4167 aa8.48□□□□□ -1.05
SMARCE1-214ENST00000578112 PNMA8CA0A1B0GUJ8 204 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 UBE2CO00762 179 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 APOA1P02647 267 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms