RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SP6Q3SY56 376 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 OR4A47Q6IF82 309 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 VKORC1L1Q8N0U8 176 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 OR4F5Q8NH21 305 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 LINC01006Q8NI28 216 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 WIPF2Q8TF74 440 aaPredicted RBP10.04□□□□□ -0.8
MKS1-206ENST00000577824 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 RBPMSQ93062 196 aaKnown RBP10.04□□□□□ -0.8
MKS1-206ENST00000577824 HSPB9Q9BQS6 159 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 MARVELD1Q9BSK0 173 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 WNT10AQ9GZT5 417 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 TMEM140Q9NV12 185 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 TENM1Q9UKZ4 2725 aa10.04□□□□□ -0.8
MKS1-206ENST00000577824 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 C9orf170A2RU37 121 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 ATG12O94817 140 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 CA2P00918 260 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 HLA-AP01891 365 aaKnown RBP10.03□□□□□ -0.8
MKS1-206ENST00000577824 OR4E1P0C645 316 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 ANXA7P20073 488 aaKnown RBP10.03□□□□□ -0.8
MKS1-206ENST00000577824 ERVK-16P61578 105 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 DHRS2Q13268 280 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 PLGLAQ15195 96 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 LYG2Q86SG7 212 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 C19orf24Q9BVV8 132 aa10.03□□□□□ -0.8
MKS1-206ENST00000577824 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
MKS1-206ENST00000577824 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
MKS1-206ENST00000577824 FCN1O00602 326 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 DUS4LO95620 317 aaKnown RBP10.02□□□□□ -0.81
MKS1-206ENST00000577824 KRASP01116 189 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 MAS1LP35410 378 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 G6PCP35575 357 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 PROK1P58294 105 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 CX3CL1P78423 397 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 FOXL1Q12952 345 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 AARDQ4LEZ3 155 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 C19orf54Q5BKX5 351 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 PLET1Q6UQ28 207 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 SLC35E3Q7Z769 313 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 FOXRED2Q8IWF2 684 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 SELENOHQ8IZQ5 122 aaKnown RBP10.02□□□□□ -0.81
MKS1-206ENST00000577824 DMBX1Q8NFW5 382 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.81
MKS1-206ENST00000577824 OR51J1Q9H342 316 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 BEX1Q9HBH7 125 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
MKS1-206ENST00000577824 TRAV6A0A075B6T7 132 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 A0A0B4J2A0 478 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 A0A0G2JRQ6 117 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 CLPSL1A2RUU4 121 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 C15orf61A6NNL5 157 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 AP4M1O00189 453 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 UPK2O00526 184 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 ATP6V0E1O15342 81 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 IL5P05113 134 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
MKS1-206ENST00000577824 VAMP1P23763 118 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 VDAC2P45880 294 aaPredicted RBP10.01□□□□□ -0.81
MKS1-206ENST00000577824 RPL8P62917 257 aaKnown RBP10.01□□□□□ -0.81
MKS1-206ENST00000577824 CFHR3Q02985 330 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 NMSQ5H8A3 153 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 SSX9Q7RTT3 188 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 LGI3Q8N145 548 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 SLC35G3Q8N808 338 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 MITD1Q8WV92 249 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 LSM10Q969L4 123 aaKnown RBP10.01□□□□□ -0.81
MKS1-206ENST00000577824 SHPKQ9UHJ6 478 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 FBXO7Q9Y3I1 522 aa10.01□□□□□ -0.81
MKS1-206ENST00000577824 PRAF2O60831 178 aa10□□□□□ -0.81
MKS1-206ENST00000577824 OR9G9P0C7N8 305 aa10□□□□□ -0.81
MKS1-206ENST00000577824 HLA-GP17693 338 aa10□□□□□ -0.81
MKS1-206ENST00000577824 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
MKS1-206ENST00000577824 VDAC1P21796 283 aa10□□□□□ -0.81
MKS1-206ENST00000577824 AKR1C2P52895 323 aa10□□□□□ -0.81
MKS1-206ENST00000577824 RGS21Q2M5E4 152 aa10□□□□□ -0.81
MKS1-206ENST00000577824 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
MKS1-206ENST00000577824 C4orf46Q504U0 113 aa10□□□□□ -0.81
MKS1-206ENST00000577824 H2BFWTQ7Z2G1 175 aa10□□□□□ -0.81
MKS1-206ENST00000577824 ZNF429Q86V71 674 aa10□□□□□ -0.81
MKS1-206ENST00000577824 ZNF695Q8IW36 515 aa10□□□□□ -0.81
MKS1-206ENST00000577824 STPG2Q8N412 459 aa10□□□□□ -0.81
MKS1-206ENST00000577824 SGMS2Q8NHU3 365 aa10□□□□□ -0.81
MKS1-206ENST00000577824 COA4Q9NYJ1 87 aa10□□□□□ -0.81
MKS1-206ENST00000577824 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
MKS1-206ENST00000577824 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
MKS1-206ENST00000577824 COL6A5A8TX70 2615 aa10□□□□□ -0.81
MKS1-206ENST00000577824 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
MKS1-206ENST00000577824 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms