RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PHB2Q99623 299 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 VPREB3Q9UKI3 123 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TMED3Q9Y3Q3 217 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 MARCH11A6NNE9 402 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RRHO14718 337 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SHOXO15266 292 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 NBR2O15453 112 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HOXA3O43365 443 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 S1PR2O95136 353 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGKV1-5P01602 117 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TMEM11P17152 192 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 VAMP1P23763 118 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CD24P25063 80 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RAB25P57735 213 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SLC9A3R2Q15599 337 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ZNF695Q8IW36 515 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C12orf45Q8N5I9 185 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 Q8N9W7 124 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR52B4Q8NGK2 314 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ZNF418Q8TF45 676 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HARBI1Q96MB7 349 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SEC22CQ9BRL7 303 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 BEX1Q9HBH7 125 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RAB18Q9NP72 206 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CACFD1Q9UGQ2 172 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SIGLEC9Q9Y336 463 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 MMP24Q9Y5R2 645 aa8.85□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TRIM77I1YAP6 450 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR2A4O95047 310 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 KRASP01116 189 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 AMY1AP04745 511 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 MAS1LP35410 378 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C5orf64Q2M2E5 130 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 VMA21Q3ZAQ7 101 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR2B11Q5JQS5 317 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RBMS3Q6XE24 437 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LYZL2Q7Z4W2 148 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ZNF429Q86V71 674 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C5orf56Q8N8D9 126 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR2A7Q96R45 310 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR51J1Q9H342 316 aa8.84□□□□□ -0.99
CDK5RAP3-204ENST00000577664 A0A1B0GU03 582 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 BTBD17A6NE02 478 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 UPK2O00526 184 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 PITX3O75364 302 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 KBTBD11O94819 623 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 RNASE1P07998 156 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 SAA1P0DJI8 122 aaPredicted RBP8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 CNTFRP26992 372 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 G6PCP35575 357 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 SRSF4Q08170 494 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 HES1Q14469 280 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 OR4A47Q6IF82 309 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 LIN54Q6MZP7 749 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 ZNF562Q6V9R5 426 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 FOXRED2Q8IWF2 684 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 CASTOR1Q8WTX7 329 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 SLC25A33Q9BSK2 321 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 ESM1Q9NQ30 184 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 ZNF580Q9UK33 172 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 ALG5Q9Y673 324 aa8.83□□□□□ -1
CDK5RAP3-204ENST00000577664 TENM3Q9P273 2699 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 A0A0G2JRQ6 117 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 HLA-DRB1P01911 266 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 ERVK-16P61578 105 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 RELBQ01201 579 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 IL15RAQ13261 267 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 HNF4GQ14541 408 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 MMDQ15546 238 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 PRSS8Q16651 343 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 GGNBP1Q5YKI7 109 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 Q6ZRM9 215 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 H2BFWTQ7Z2G1 175 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 MMD2Q8IY49 270 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 Q8N2B8 174 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 DMBX1Q8NFW5 382 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 OR52E5Q8NH55 327 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 GPR146Q96CH1 333 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 RBMXL1Q96E39 390 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 RRNAD1Q96FB5 475 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 CHIAQ9BZP6 476 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 TMEM14BQ9NUH8 114 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 TMEM140Q9NV12 185 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 FKBP11Q9NYL4 201 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 KIAA1456Q9P272 454 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
CDK5RAP3-204ENST00000577664 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
CDK5RAP3-204ENST00000577664 NCBP2LA6PVI3 153 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-204ENST00000577664 INS-IGF2F8WCM5 200 aa8.81□□□□□ -1
CDK5RAP3-204ENST00000577664 SLC25A17O43808 307 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms