RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 EXPH5Q8NEV8 1989 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 FKBP2P26885 142 aaKnown RBP12.15□□□□□ -0.46
SCARF1-209ENST00000576012 UBE2NP61088 152 aaKnown RBP12.15□□□□□ -0.46
SCARF1-209ENST00000576012 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 Q6ZS49 121 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 NINJ1Q92982 152 aa12.15□□□□□ -0.46
SCARF1-209ENST00000576012 PINLYPA6NC86 204 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 H0Y8G0 127 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 SSTR5P35346 364 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 EDDM3AQ14507 147 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 ZC2HC1AQ96GY0 325 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 GJE1A6NN92 205 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 PMS2P5A8MQ11 134 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 GPX1P07203 203 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 GNG3P63215 75 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
SCARF1-209ENST00000576012 PRO3102Q9H379 93 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
SCARF1-209ENST00000576012 PSPNO60542 156 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 CGAP01215 116 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 IGLV3-19P01714 112 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 CFIP05156 583 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 OR10J4P0C629 311 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 GFRA1P56159 465 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 VAMP3Q15836 100 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 LEMD1Q68G75 181 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 LINC00473A8K010 186 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FCGR3BO75015 233 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
SCARF1-209ENST00000576012 CRYBB3P26998 211 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 PLP2Q04941 152 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 HES7Q9BYE0 225 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 MS4A5Q9H3V2 200 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 KCNIP1Q9NZI2 227 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 CFAP47Q6ZTR5 3102 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 ROS1P08922 2347 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 IGHV1-45A0A0A0MS14 117 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A10PA6NDY2 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A18PA6NE21 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A16PA6NEW6 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A20PA6NIJ5 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A8PA6NJQ4 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A7PA6NKC0 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A22PA8MWA6 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A12PA8MX19 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A5PA8MXJ8 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A23PA8MXZ1 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 NEURL1O76050 574 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 MT-CO3P00414 261 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A15PP0C7V4 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A13PP0C7W8 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A14PP0C7W9 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FAM90A24PP0C7X0 464 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 B3GALT5-AS1P59052 145 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 SF3B5Q9BWJ5 86 aaKnown RBP12.13□□□□□ -0.47
SCARF1-209ENST00000576012 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 FZR1Q9UM11 496 aa12.13□□□□□ -0.47
SCARF1-209ENST00000576012 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-209ENST00000576012 ZNF83P51522 516 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 BRWD1-AS2P59051 145 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 RPEL1Q2QD12 228 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 WDR73Q6P4I2 378 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 SPSB4Q96A44 273 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
SCARF1-209ENST00000576012 TTC28Q96AY4 2481 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 DPRXA6NFQ7 191 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 COX6A1P12074 109 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 OR2M7Q8NG81 312 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 GALMQ96C23 342 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
SCARF1-209ENST00000576012 UQCR10Q9UDW1 63 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 A0A1W2PS18 150 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 C12orf77C9JDV5 145 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 GOSR1O95249 250 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 IGLC2P0DOY2 106 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 TDGF1P13385 188 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-209ENST00000576012 RBX1P62877 108 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 PMCHL1Q16048 86 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 FAM216AQ8WUB2 273 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
SCARF1-209ENST00000576012 RNF2Q99496 336 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms