RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 CCDC32Q9BV29 185 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 KCNIP3Q9Y2W7 256 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 TSSC4Q9Y5U2 329 aaPredicted RBP7.52□□□□□ -1.21
CCDC40-214ENST00000575431 COL6A5A8TX70 2615 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 MARCH11A6NNE9 402 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 S1PR2O95136 353 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 IL6RP08887 468 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 CD28P10747 220 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 IL7P13232 177 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 RPL8P62917 257 aaKnown RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TNXAQ16473 311 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 BAK1Q16611 211 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 ZNF585BQ52M93 769 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 PRR31Q5SQ13 230 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 THOC7Q6I9Y2 204 aaKnown RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 OR4A47Q6IF82 309 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TMEM65Q6PI78 240 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 UNQ5815/PRO19632Q6UWF5 114 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 RNF152Q8N8N0 203 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 MINDY2Q8NBR6 621 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 DMBX1Q8NFW5 382 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 OR4F17Q8NGA8 305 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 MRGPRFQ96AM1 343 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 OR4F4Q96R69 305 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TSC22D3Q99576 134 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 SLA2Q9H6Q3 261 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 AKIP1Q9NQ31 210 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 FOXA2Q9Y261 457 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 WSB1Q9Y6I7 421 aa7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TET2Q6N021 2002 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-214ENST00000575431 TEX13DA0A0J9YY54 714 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 A0A1W2PN81 502 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 H3BUA1 57 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 UPK2O00526 184 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 ARPC1BO15143 372 aaKnown RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SNAPC5O75971 98 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 BRI3O95415 125 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 KRASP01116 189 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 IGLV1-40P01703 118 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 EGR2P11161 476 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 PI3P19957 117 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 UCP1P25874 307 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 PSMB8P28062 276 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 CHRNA7P36544 502 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 GNB1P62873 340 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 NDPQ00604 133 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 DHODHQ02127 395 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 PJVKQ0ZLH3 352 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 ZNF846Q147U1 533 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 ECSCRQ19T08 205 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 C19orf54Q5BKX5 351 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SSX9Q7RTT3 188 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SGPP2Q8IWX5 399 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 VKORC1L1Q8N0U8 176 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 C11orf44Q8N8P7 122 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 LFNGQ8NES3 379 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 GRPEL2Q8TAA5 225 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 PHB2Q99623 299 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 RTBDNQ9BSG5 229 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 COMMD5Q9GZQ3 224 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 C5orf66Q9H5L9 145 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 ZNF430Q9H8G1 570 aaPredicted RBP7.5□□□□□ -1.21
CCDC40-214ENST00000575431 TMEM140Q9NV12 185 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 FKBP11Q9NYL4 201 aa7.5□□□□□ -1.21
CCDC40-214ENST00000575431 MSGN1A6NI15 193 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 G3V318 75 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 ANXA3P12429 323 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 HLA-GP17693 338 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 RPL27AP46776 148 aaKnown RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 CDX1P47902 265 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 RBMS2Q15434 407 aaKnown RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 MRGPRG-AS1Q2M3A8 158 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 TRIM16LQ309B1 348 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 KHDC1LQ5JSQ8 128 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 C10orf99Q6UWK7 81 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 H2BFWTQ7Z2G1 175 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 HSD17B13Q7Z5P4 300 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 GALNT14Q96FL9 552 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 UBE2E2Q96LR5 201 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 SRSF8Q9BRL6 282 aaKnown RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 FAM103A1Q9BTL3 118 aaKnown RBP7.49□□□□□ -1.21
CCDC40-214ENST00000575431 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 NAA60Q9H7X0 242 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 PRNDQ9UKY0 176 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 FBXO7Q9Y3I1 522 aa7.49□□□□□ -1.21
CCDC40-214ENST00000575431 CRYM-AS1A6NIL9 109 aa7.48□□□□□ -1.21
CCDC40-214ENST00000575431 CDS2O95674 445 aa7.48□□□□□ -1.21
CCDC40-214ENST00000575431 DHFRP00374 187 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms