RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CLEC7AQ9BXN2 247 aa23.1■■□□□ 1.29
CTDNEP1-210ENST00000574322 NDUFS7O75251 213 aa23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 IFNA5P01569 189 aa23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 ARG1P05089 322 aa23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 PUSL1Q8N0Z8 303 aaKnown RBP23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 MMP26Q9NRE1 261 aa23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 BET1LQ9NYM9 111 aa23.09■■□□□ 1.29
CTDNEP1-210ENST00000574322 UMAD1C9J7I0 102 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 TEX46H3BTG2 121 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 TRIM77I1YAP6 450 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 OR8U8P0C7N1 319 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 VDAC2P45880 294 aaPredicted RBP23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 ATP6V1FQ16864 119 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 HLA-DRB5Q30154 266 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 BTNL8Q6UX41 500 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 IL34Q6ZMJ4 242 aa23.08■■□□□ 1.29
CTDNEP1-210ENST00000574322 CENPEQ02224 2701 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 SRRM4A7MD48 611 aaKnown RBP23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 M0R1W7 72 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 UQCC3Q6UW78 93 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 TGIF2LXQ8IUE1 241 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 PRNDQ9UKY0 176 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 TCF19Q9Y242 345 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 ZNF257Q9Y2Q1 563 aa23.08■■□□□ 1.28
CTDNEP1-210ENST00000574322 BAHCC1Q9P281 2608 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 UPK2O00526 184 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 MC5RP33032 325 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 HSPE1P61604 102 aaKnown RBP23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 DIAPH2-AS1Q14236 149 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 LHX4Q969G2 390 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 NUP50Q9UKX7 468 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 NBPF19A0A087WUL8 3843 aa23.07■■□□□ 1.28
CTDNEP1-210ENST00000574322 CELSR2Q9HCU4 2923 aa23.06■■□□□ 1.28
CTDNEP1-210ENST00000574322 LOC105371242A0A075B767 164 aa23.06■■□□□ 1.28
CTDNEP1-210ENST00000574322 SLC38A11Q08AI6 406 aa23.06■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR4C13Q8NGP0 309 aa23.06■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR2G3Q8NGZ4 309 aa23.06■■□□□ 1.28
CTDNEP1-210ENST00000574322 REG1BP48304 166 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 RAB13P51153 203 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 F2RL1P55085 397 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 RPP30P78346 268 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 LRRC75BQ2VPJ9 315 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 Q6ZRG5 221 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 LILRB2Q8N423 598 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 Q8N7P7 452 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 PINX1Q96BK5 328 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 FLYWCH2Q96CP2 140 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 CLCC1Q96S66 551 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 WASHC3Q9Y3C0 194 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 C15orf62A8K5M9 175 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 KRBOX1C9JBD0 128 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 SHOXO15266 292 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 ZP3P21754 424 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 C1orf122Q6ZSJ8 110 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 HIPK2Q9H2X6 1198 aa23.05■■□□□ 1.28
CTDNEP1-210ENST00000574322 BUB1B-PAK6H3BSN5 160 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 H7C2Y5 167 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 PJVKQ0ZLH3 352 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 SPINK9Q5DT21 86 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR10P1Q8NGE3 313 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 FKBP11Q9NYL4 201 aa23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 TET2Q6N021 2002 aaPredicted RBP23.04■■□□□ 1.28
CTDNEP1-210ENST00000574322 KRTAP10-9P60411 292 aa23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 VWC2Q2TAL6 325 aa23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 SCGB1C1Q8TD33 95 aa23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 HARBI1Q96MB7 349 aa23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 PSMG3Q9BT73 122 aaPredicted RBP23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 ONECUT1Q9UBC0 465 aa23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 AMMECR1Q9Y4X0 333 aaPredicted RBP23.03■■□□□ 1.28
CTDNEP1-210ENST00000574322 KBTBD11O94819 623 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 SAA1P0DJI8 122 aaPredicted RBP23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR8G2PQ6IF36 304 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 TMEM182Q6ZP80 229 aaPredicted RBP23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 KIR3DL3Q8N743 410 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR4P4Q8NGL7 312 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR4A5Q8NH83 315 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 WDR61Q9GZS3 305 aaKnown RBP23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 HRH4Q9H3N8 390 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 IGHV2-5P01817 119 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 RUNX1Q01196 453 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR11H6Q8NGC7 330 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 TMEM147Q9BVK8 224 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 OR51B2Q9Y5P1 312 aa23.02■■□□□ 1.28
CTDNEP1-210ENST00000574322 LY6LH3BQJ8 138 aa23.01■■□□□ 1.27
CTDNEP1-210ENST00000574322 CAMLGP49069 296 aa23.01■■□□□ 1.27
CTDNEP1-210ENST00000574322 VSTM2AQ8TAG5 236 aa23.01■■□□□ 1.27
CTDNEP1-210ENST00000574322 NARFLQ9H6Q4 476 aa23.01■■□□□ 1.27
CTDNEP1-210ENST00000574322 HEYLQ9NQ87 328 aaPredicted RBP23.01■■□□□ 1.27
CTDNEP1-210ENST00000574322 FBN2P35556 2912 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 PRTN3P24158 256 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 SLC25A24Q6NUK1 477 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 DPPA3Q6W0C5 159 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 THNSL2Q86YJ6 484 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 OR5B3Q8NH48 314 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 NRGNQ92686 78 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 RFNGQ9Y644 331 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 UNC79Q9P2D8 2635 aa23■■□□□ 1.27
CTDNEP1-210ENST00000574322 PRH1P02810 166 aa22.99■■□□□ 1.27
CTDNEP1-210ENST00000574322 CENPVQ7Z7K6 275 aaPredicted RBP22.99■■□□□ 1.27
CTDNEP1-210ENST00000574322 COMMD1Q8N668 190 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms