RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SYNJ2BPP57105 145 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 LSM3P62310 102 aaKnown RBP13.28□□□□□ -0.28
SMG6-214ENST00000573827 UBE2NLQ5JXB2 153 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 OR5AP2Q8NGF4 316 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 OR9G4Q8NGQ1 327 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 SLC25A46Q96AG3 418 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 OR4C12Q96R67 309 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 THAP7Q9BT49 309 aaPredicted RBP13.28□□□□□ -0.28
SMG6-214ENST00000573827 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
SMG6-214ENST00000573827 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 FAM223BA6NKX1 122 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 CREBL2O60519 120 aaPredicted RBP13.27□□□□□ -0.29
SMG6-214ENST00000573827 CSN3P07498 182 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 MYOD1P15172 320 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 CBX5P45973 191 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 MECP2P51608 486 aaKnown RBP13.27□□□□□ -0.29
SMG6-214ENST00000573827 POU2AF1Q16633 256 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 FAM223AQ8IWN6 122 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 FANCD2OSQ96PS1 177 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 SIGLEC8Q9NYZ4 499 aa13.27□□□□□ -0.29
SMG6-214ENST00000573827 LYSTQ99698 3801 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.26□□□□□ -0.29
SMG6-214ENST00000573827 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 CRYGCP07315 174 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 GNRHRP30968 328 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 KIR2DS2P43631 304 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 TAS2R20P59543 309 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 NCS1P62166 190 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 DHRS11Q6UWP2 260 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 ADAMTSL5Q6ZMM2 481 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 SAMD12Q8N8I0 201 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 VSTM2AQ8TAG5 236 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 S100A16Q96FQ6 103 aaKnown RBP13.26□□□□□ -0.29
SMG6-214ENST00000573827 ELOVL1Q9BW60 279 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 SLC5A7Q9GZV3 580 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 SLC2A9Q9NRM0 540 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 BET1LQ9NYM9 111 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 ZNF257Q9Y2Q1 563 aa13.26□□□□□ -0.29
SMG6-214ENST00000573827 MPPED1O15442 326 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 ACTL6BO94805 426 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 FRMD6-AS1P0C7T7 363 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 AREGP15514 252 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 MAS1LP35410 378 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 RPL27AP46776 148 aaKnown RBP13.25□□□□□ -0.29
SMG6-214ENST00000573827 EXOSC2Q13868 293 aaKnown RBP13.25□□□□□ -0.29
SMG6-214ENST00000573827 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 LYSMD2Q8IV50 215 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
SMG6-214ENST00000573827 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
SMG6-214ENST00000573827 TRAV3A0A0B4J244 114 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 SULT1C2O00338 296 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 OR2J3O76001 311 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 HRASP01112 189 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
SMG6-214ENST00000573827 SMIM18P0DKX4 95 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 RFX2P48378 723 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 FXYD4P59646 89 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 RPL8P62917 257 aaKnown RBP13.24□□□□□ -0.29
SMG6-214ENST00000573827 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 SSX9Q7RTT3 188 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 MOB3AQ96BX8 217 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 C19orf73Q9NVV2 129 aa13.24□□□□□ -0.29
SMG6-214ENST00000573827 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 A8MZ25 164 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 CTRB1P17538 263 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 HLA-GP17693 338 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 TAS2R31P59538 309 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 OR2B8PP59922 312 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 C15orf32Q32M92 178 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 CTRB2Q6GPI1 263 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 TMEM17Q86X19 198 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 OR4A5Q8NH83 315 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 GPX8Q8TED1 209 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 CCDC140Q96MF4 163 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 RSRP1Q9BUV0 290 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 VCX3AQ9NNX9 186 aa13.23□□□□□ -0.29
SMG6-214ENST00000573827 PLECQ15149 4684 aaKnown RBP13.22□□□□□ -0.29
SMG6-214ENST00000573827 IGLC7A0M8Q6 106 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 IZUMO1RA6ND01 250 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 NDUFB8O95169 186 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 HPRT1P00492 218 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 PSMB6P28072 239 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 VBP1P61758 197 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 SLC25A42Q86VD7 318 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 FYTTD1Q96QD9 318 aaKnown RBP13.22□□□□□ -0.29
SMG6-214ENST00000573827 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 EHFQ9NZC4 300 aa13.22□□□□□ -0.29
SMG6-214ENST00000573827 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 UPK2O00526 184 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 S1PR2O95136 353 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 PMP2P02689 132 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms