RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 DOK5Q9P104 306 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 IFNL4K9M1U5 179 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 SYNGR2O43760 224 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 MMP9P14780 707 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 ID3Q02535 119 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 ICAM4Q14773 271 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 TMPRSS5Q9H3S3 457 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 GFOD1Q9NXC2 390 aa11.51□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 TNCP24821 2201 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 BTBD17A6NE02 478 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 GZMHP20718 246 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 RPL30P62888 115 aaKnown RBP11.5□□□□□ -0.57
TVP23A-207ENST00000573360 Q6ZRM9 215 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 TUBA4BQ9H853 241 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 OR6C3Q9NZP0 311 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 H0Y980 276 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 NMSQ5H8A3 153 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 STUMQ69YW2 141 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 OR5D13Q8NGL4 314 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 LHX4Q969G2 390 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
TVP23A-207ENST00000573360 PPP1R2P9O14990 202 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 LHBP01229 141 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 BAXQ07812 192 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 C3orf36Q3SXR2 165 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
TVP23A-207ENST00000573360 CTSZQ9UBR2 303 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 LY86O95711 162 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 LMO1P25800 156 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF134P52741 427 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 HBG1P69891 147 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 HBG2P69892 147 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 TFF3Q07654 80 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
TVP23A-207ENST00000573360 CSMD1Q96PZ7 3565 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 CLEC18AA5D8T8 446 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 CLEC18CQ8NCF0 446 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
TVP23A-207ENST00000573360 hADV38S2A0JD32 116 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 ARF6P62330 175 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 ENSAO43768 121 aaKnown RBP11.48□□□□□ -0.57
TVP23A-207ENST00000573360 FABP4P15090 132 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 GATA4P43694 442 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 SPNS3Q6ZMD2 512 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 FAM210BQ96KR6 192 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 DIRC2Q96SL1 478 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 CABLES2Q9BTV7 478 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 SLC25A22Q9H936 323 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 CLN8Q9UBY8 286 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 OR10X1Q8NGY0 326 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 GGACTQ9BVM4 153 aa11.48□□□□□ -0.57
TVP23A-207ENST00000573360 MAP1LC3B2A6NCE7 125 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 S1PR2O95136 353 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 PAX9P55771 341 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 FBXL19-AS1Q494R0 122 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF525Q8N782 197 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 MAP1LC3BQ9GZQ8 125 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 CBLN4Q9NTU7 201 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 CELSR1Q9NYQ6 3014 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
TVP23A-207ENST00000573360 ELOBQ15370 118 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 TIMD4Q96H15 378 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 A0A1B0GU03 582 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
TVP23A-207ENST00000573360 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
TVP23A-207ENST00000573360 LINC00473A8K010 186 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 CTAG1AP78358 180 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 MORN2Q502X0 79 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF843Q8N446 348 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 SDSLQ96GA7 329 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF714Q96N38 554 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 IFNA1P01562 189 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
TVP23A-207ENST00000573360 SLC38A11Q08AI6 406 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 CATR1Q13166 79 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
TVP23A-207ENST00000573360 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 ZNF383Q8NA42 475 aa11.46□□□□□ -0.57
TVP23A-207ENST00000573360 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
TVP23A-207ENST00000573360 KBTBD11-OT1A0A1B0GTJ5 212 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms