RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 RPA2P15927 270 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 CRIP2P52943 208 aaPredicted RBP17.37■□□□□ 0.37
RAB40B-207ENST00000572603 DHODHQ02127 395 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 ZNF562Q6V9R5 426 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 LHFPL5Q8TAF8 219 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 VSTM2AQ8TAG5 236 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 GLYATL2Q8WU03 294 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 SEC22AQ96IW7 307 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 TMEM222Q9H0R3 208 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 PARP11Q9NR21 331 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 TMEM140Q9NV12 185 aa17.37■□□□□ 0.37
RAB40B-207ENST00000572603 TRAV3A0A0B4J244 114 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 AKR1C4P17516 323 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 G6PCP35575 357 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 C19orf54Q5BKX5 351 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 FOXRED2Q8IWF2 684 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 CADM3Q8N126 398 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 CENPSQ8N2Z9 138 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 STPG2Q8N412 459 aa17.36■□□□□ 0.37
RAB40B-207ENST00000572603 HAX1O00165 279 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 KRASP01116 189 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 IGKV1-5P01602 117 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 SERPINE2P07093 398 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 P0C879 139 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 CFHR3Q02985 330 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 TMEM187Q14656 261 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 C10orf99Q6UWK7 81 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 SLC25A42Q86VD7 318 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 SGPP2Q8IWX5 399 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 MMD2Q8IY49 270 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 OR4A5Q8NH83 315 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 ARPC1AQ92747 370 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 TSC22D3Q99576 134 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 AIFM2Q9BRQ8 373 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 C20orf85Q9H1P6 137 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 PRR13Q9NZ81 148 aa17.35■□□□□ 0.37
RAB40B-207ENST00000572603 UPK2O00526 184 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 CDS2O95674 445 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 ERVK-16P61578 105 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 GNB1P62873 340 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 FXYD3Q14802 87 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 TRIM16LQ309B1 348 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 TMEM128Q5BJH2 165 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 C10orf55Q5SWW7 151 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 DMBX1Q8NFW5 382 aa17.34■□□□□ 0.37
RAB40B-207ENST00000572603 FAM103A1Q9BTL3 118 aaKnown RBP17.34■□□□□ 0.37
RAB40B-207ENST00000572603 CREBL2O60519 120 aaPredicted RBP17.33■□□□□ 0.36
RAB40B-207ENST00000572603 TCRBP04435 133 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 OR9G9P0C7N8 305 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 MYOD1P15172 320 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 SRSF4Q08170 494 aaKnown RBP17.33■□□□□ 0.36
RAB40B-207ENST00000572603 PPP1R1AQ13522 171 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 TNXAQ16473 311 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 MZT2BQ6NZ67 158 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 CHPT1Q8WUD6 406 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 ZNF747Q9BV97 191 aa17.33■□□□□ 0.36
RAB40B-207ENST00000572603 A0A1B0GW64 132 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 G3V318 75 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 FGF2P09038 288 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 UBE2MP61081 183 aaKnown RBP17.32■□□□□ 0.36
RAB40B-207ENST00000572603 SGMS2Q8NHU3 365 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 GRPEL2Q8TAA5 225 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 SRSF12Q8WXF0 261 aaKnown RBP17.32■□□□□ 0.36
RAB40B-207ENST00000572603 TMEM56Q96MV1 263 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 NUBP2Q9Y5Y2 271 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 TMEM56-RWDD3S4R434 201 aa17.32■□□□□ 0.36
RAB40B-207ENST00000572603 A0A0G2JRQ6 117 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 PSMB11A5LHX3 300 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 ANXA7P20073 488 aaKnown RBP17.31■□□□□ 0.36
RAB40B-207ENST00000572603 PPIFP30405 207 aaKnown RBP17.31■□□□□ 0.36
RAB40B-207ENST00000572603 MAS1LP35410 378 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 RPL8P62917 257 aaKnown RBP17.31■□□□□ 0.36
RAB40B-207ENST00000572603 ASPHD1Q5U4P2 390 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 SELENOHQ8IZQ5 122 aaKnown RBP17.31■□□□□ 0.36
RAB40B-207ENST00000572603 CITED1Q99966 193 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 NUDT15Q9NV35 164 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 WSB1Q9Y6I7 421 aa17.31■□□□□ 0.36
RAB40B-207ENST00000572603 TRAV41A0A0B4J266 112 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 FAM240BA0A1B0GVZ2 78 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 CGB1A6NKQ9 187 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 E7EUB6 86 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 SFT2D2O95562 160 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 HLA-GP17693 338 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 ECSCRQ19T08 205 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 IZUMO4Q1ZYL8 232 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 ANKRD55Q3KP44 614 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 TCTEX1D4Q5JR98 221 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 TMEM268Q5VZI3 342 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 HIST2H2BDQ6DRA6 164 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 ZNF329Q86UD4 541 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 ABHD5Q8WTS1 349 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 RBPMSQ93062 196 aaKnown RBP17.3■□□□□ 0.36
RAB40B-207ENST00000572603 IL22RA2Q969J5 263 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 KCNIP3Q9Y2W7 256 aa17.3■□□□□ 0.36
RAB40B-207ENST00000572603 DBX1A6NMT0 343 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 TEX22C9J3V5 150 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 SOX15O60248 233 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 CNIH1O95406 144 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 VDAC1P21796 283 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms