RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 HRASLSQ9HDD0 168 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 ADAM30Q9UKF2 790 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 FAM25AB3EWG3 89 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 FAM25CB3EWG5 89 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 FAM25GB3EWG6 89 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 E7EUB6 86 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 GABARAPO95166 117 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 HRASP01112 189 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 APOA1P02647 267 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 RPA2P15927 270 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZP3P21754 424 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 GNRHRP30968 328 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 HRH1P35367 487 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 RPL27AP46776 148 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 TAS2R46P59540 309 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 CTF1Q16619 201 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR4A47Q6IF82 309 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 TMEM167AQ8TBQ9 72 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 USMG5Q96IX5 58 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 B9D2Q9BPU9 175 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 AKIP1Q9NQ31 210 aa13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-207ENST00000572043 DPPA5A6NC42 116 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 TEX22C9J3V5 150 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 OR2J3O76001 311 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 RLN1P04808 185 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 SPNP16150 400 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 TTC9CQ8N5M4 171 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 GPX8Q8TED1 209 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 MRPS26Q9BYN8 205 aaKnown RBP13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 FXYD6Q9H0Q3 95 aa13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
CTDNEP1-207ENST00000572043 A0A1B0GW64 132 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 S1PR2O95136 353 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 BRI3O95415 125 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 REG1AP05451 166 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 NAT1P18440 290 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 EXOSC2Q13868 293 aaKnown RBP13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 MZT2AQ6P582 158 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 DHRS11Q6UWP2 260 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 OR6F1Q8NGZ6 308 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 ELOVL1Q9BW60 279 aa13.63□□□□□ -0.23
CTDNEP1-207ENST00000572043 TRAV3A0A0B4J244 114 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 HPRT1P00492 218 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 AREGP15514 252 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 HLA-GP17693 338 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 TSPAN5P62079 268 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 GPR141Q7Z602 305 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 DMBX1Q8NFW5 382 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 OR6Q1Q8NGQ2 317 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 AP3S1Q92572 193 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 ASCL2Q99929 193 aa13.62□□□□□ -0.23
CTDNEP1-207ENST00000572043 TGP01266 2768 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 GP9P14770 177 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 NQO2P16083 231 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 ZNF182P17025 639 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 MAS1LP35410 378 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 TAS2R31P59538 309 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 KLF5Q13887 457 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 RPEL1Q2QD12 228 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 PHLDA2Q53GA4 152 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 VAX1Q5SQQ9 334 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 SLC25A42Q86VD7 318 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 OR9G4Q8NGQ1 327 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 OR4A5Q8NH83 315 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 SCPEP1Q9HB40 452 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 SLC2A9Q9NRM0 540 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 BET1LQ9NYM9 111 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 EXTL2Q9UBQ6 330 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 S4R3C0 116 aa13.61□□□□□ -0.23
CTDNEP1-207ENST00000572043 TRBV9A0A0B4J1U6 114 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 UPK2O00526 184 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 RCVRNP35243 200 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 C15orf32Q32M92 178 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 NECAP1Q8NC96 275 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 BORCS5Q969J3 196 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 AIFM2Q9BRQ8 373 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 ZNF257Q9Y2Q1 563 aa13.6□□□□□ -0.23
CTDNEP1-207ENST00000572043 CGB1A6NKQ9 187 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 M0QYG6 137 aa13.59□□□□□ -0.23
CTDNEP1-207ENST00000572043 GPR31O00270 319 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms