RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 FLYWCH2Q96CP2 140 aaKnown RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 GNPNAT1Q96EK6 184 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 CLCC1Q96S66 551 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 TSNAXQ99598 290 aaKnown RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 NARFLQ9H6Q4 476 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 TMEM14BQ9NUH8 114 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ONECUT1Q9UBC0 465 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 NUP50Q9UKX7 468 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 PRNDQ9UKY0 176 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 TCF19Q9Y242 345 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ZFYVE26Q68DK2 2539 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 MYO18BQ8IUG5 2567 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 MED13LQ71F56 2210 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 DCHS2Q6V1P9 2916 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SPTAN1Q13813 2472 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 RAB19A4D1S5 217 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SRRM4A7MD48 611 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 C15orf62A8K5M9 175 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 UMAD1C9J7I0 102 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 LY6LH3BQJ8 138 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 TRIM77I1YAP6 450 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 I3L521 148 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 ENSAO43768 121 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 KBTBD11O94819 623 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGKV1-16P04430 117 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR8U8P0C7N1 319 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SAA1P0DJI8 122 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 USF1P22415 310 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 PRTN3P24158 256 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 COX7A1P24310 79 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 DLX1P56177 255 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 LMO4P61968 165 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 ARF6P62330 175 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 RPP30P78346 268 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 PAX2Q02962 417 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 LRRC75BQ2VPJ9 315 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SPINK9Q5DT21 86 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 HCP5Q6MZN7 132 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 BTNL8Q6UX41 500 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 LILRB2Q8N423 598 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 PNKDQ8N490 385 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR11H6Q8NGC7 330 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR10P1Q8NGE3 313 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4P4Q8NGL7 312 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4C13Q8NGP0 309 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR2G3Q8NGZ4 309 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4A5Q8NH83 315 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 CLDND2Q8NHS1 167 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 TMEM167AQ8TBQ9 72 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SCGB1C1Q8TD33 95 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 MARC2Q969Z3 335 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 HARBI1Q96MB7 349 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 CCL19Q99731 98 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 PSMG3Q9BT73 122 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 TMEM147Q9BVK8 224 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 MS4A7Q9GZW8 240 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 SH3BGRL3Q9H299 93 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 HIPK2Q9H2X6 1198 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 UNKLQ9H9P5 680 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 HEYLQ9NQ87 328 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 PARP11Q9NR21 331 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 MMP26Q9NRE1 261 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 FKBP11Q9NYL4 201 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR51B2Q9Y5P1 312 aa4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 ANKRD17O75179 2603 aaKnown RBP4.97□□□□□ -1.61
TRAPPC1-204ENST00000571947 ZNF462Q96JM2 2506 aa4.96□□□□□ -1.61
TRAPPC1-204ENST00000571947 ADGRG4Q8IZF6 3080 aa4.96□□□□□ -1.61
TRAPPC1-204ENST00000571947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.96□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGHV1-3A0A0C4DH29 117 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 IGHV2-70DA0A0C4DH43 119 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 TEX50A0A1B0GTY4 177 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 ODF3BA8MYP8 253 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 TEX46H3BTG2 121 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 NDUFS8O00217 210 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 FOXH1O75593 365 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 IGLV2-23P01705 113 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 COX6B1P14854 86 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 ZFP36P26651 326 aaKnown RBP4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 HTR1DP28221 377 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 CEACAM3P40198 252 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 LGALS7P47929 136 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 CAMLGP49069 296 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 HOXA1P49639 335 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 RPS16P62249 146 aaKnown RBP4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 PRCDQ00LT1 54 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 RUNX1Q01196 453 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 PJVKQ0ZLH3 352 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 VWC2Q2TAL6 325 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 VMA21Q3ZAQ7 101 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 TOR2AQ5JU69 321 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 TPTE2P1Q5T6R2 138 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 PXDC1Q5TGL8 231 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 SP5Q6BEB4 398 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 OR8G2PQ6IF36 304 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 SLC25A24Q6NUK1 477 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 UQCC3Q6UW78 93 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 IL34Q6ZMJ4 242 aa4.96□□□□□ -1.62
TRAPPC1-204ENST00000571947 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms