RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 S1PR2O95136 353 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 DUS4LO95620 317 aaKnown RBP7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 RPA2P15927 270 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 RCVRNP35243 200 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 TMBIM6P55061 237 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 ZNF45Q02386 682 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 ZNF585BQ52M93 769 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 PYHIN1Q6K0P9 492 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 MMD2Q8IY49 270 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 ADAD2Q8NCV1 583 aaKnown RBP7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 OR6F1Q8NGZ6 308 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 TMEM167AQ8TBQ9 72 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 RAB2BQ8WUD1 216 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 AP3S1Q92572 193 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 OR2A7Q96R45 310 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 PHB2Q99623 299 aa7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 TINAGL1Q9GZM7 467 aaPredicted RBP7.89□□□□□ -1.15
GTF3C1-213ENST00000571886 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 SEC14L6B5MCN3 397 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 LINC01619G3V211 115 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 H3BMQ9 156 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 RGS5O15539 181 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 TRBV12-3P01733 135 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 HSPB1P04792 205 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 RLN1P04808 185 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 OR8U8P0C7N1 319 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 OR9G9P0C7N8 305 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 KIR2DS2P43631 304 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 TSPAN5P62079 268 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 DGCR2P98153 550 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 PHLDA2Q53GA4 152 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 AADACL3Q5VUY0 350 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 OR4A47Q6IF82 309 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 REC114Q7Z4M0 266 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 OR4D10Q8NGI6 311 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 FCAMRQ8WWV6 532 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 DPF1Q92782 380 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 ISOC1Q96CN7 298 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 TMEM68Q96MH6 324 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 MCRIP2Q9BUT9 160 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 SLA2Q9H6Q3 261 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 COA4Q9NYJ1 87 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 MTFP1Q9UDX5 166 aa7.88□□□□□ -1.15
GTF3C1-213ENST00000571886 H3BUA1 57 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 GPR31O00270 319 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 UPK2O00526 184 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 HPRT1P00492 218 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 HRASP01112 189 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 CD3DP04234 171 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 ZNF735P0CB33 412 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 AREGP15514 252 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 LPAR6P43657 344 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 CATR1Q13166 79 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 VAX1Q5SQQ9 334 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 C9orf66Q5T8R8 295 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 TTC9CQ8N5M4 171 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 FYTTD1Q96QD9 318 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 RSRP1Q9BUV0 290 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 SLIRPQ9GZT3 109 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 BET1LQ9NYM9 111 aa7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 CCDC59Q9P031 241 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 RSL24D1Q9UHA3 163 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-213ENST00000571886 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 C13orf42A0A1B0GVH6 325 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 OVOL1O14753 267 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 MPPED1O15442 326 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 ACTL6BO94805 426 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 BRI3O95415 125 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 REG1AP05451 166 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 NQO2P16083 231 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 PI3P19957 117 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 F2RP25116 425 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 CD40LGP29965 261 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 TAS2R31P59538 309 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 RPL8P62917 257 aaKnown RBP7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 FAAP20Q6NZ36 180 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 ZNF343Q6P1L6 599 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 LHFPL1Q86WI0 220 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 VSTM2AQ8TAG5 236 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 FANCD2OSQ96PS1 177 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 PRR25Q96S07 402 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 BCL7BQ9BQE9 202 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 PLEKHA2Q9HB19 425 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 HRASLSQ9HDD0 168 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 AKIP1Q9NQ31 210 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 TMEM140Q9NV12 185 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 NSG2Q9Y328 171 aa7.86□□□□□ -1.15
GTF3C1-213ENST00000571886 GABARAPH6UMI1 98 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 OR2J3O76001 311 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 TPPPO94811 219 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 IGKV1-39P01597 117 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 CD74P04233 296 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 IGKV1D-39P04432 117 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 HLA-GP17693 338 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 MAS1LP35410 378 aa7.85□□□□□ -1.15
GTF3C1-213ENST00000571886 G6PCP35575 357 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms