RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DIABLOQ9NR28 239 aa9.48□□□□□ -0.89
CTDNEP1-205ENST00000570828 TAS2R8Q9NYW2 309 aa9.48□□□□□ -0.89
CTDNEP1-205ENST00000570828 PEF1Q9UBV8 284 aaKnown RBP9.48□□□□□ -0.89
CTDNEP1-205ENST00000570828 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 TMEM127O75204 238 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 IGLV2-14P01704 120 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 SYNJ2BPP57105 145 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 RHOGP84095 191 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 ZNF343Q6P1L6 599 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 HOGA1Q86XE5 327 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 CROCCP3Q8IVE0 287 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 GVQW1Q8N7I0 195 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 OR13F1Q8NGS4 319 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 SECTM1Q8WVN6 248 aa9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 KMT2CQ8NEZ4 4911 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-205ENST00000570828 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 KBTBD11O94819 623 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR2A4O95047 310 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 IGLV1-51P01701 117 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 PRH1P02810 166 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 FCGR2CP31995 323 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 KIR2DS2P43631 304 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 EXOSC2Q13868 293 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 KLF5Q13887 457 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 MSMO1Q15800 293 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 TATDN3Q17R31 274 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 SLC25A42Q86VD7 318 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 MFSD4AQ8N468 514 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR2A7Q96R45 310 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 AUNIPQ9H7T9 357 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 AKIP1Q9NQ31 210 aa9.46□□□□□ -0.9
CTDNEP1-205ENST00000570828 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 TNFSF12O43508 249 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 AIREO43918 545 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 RBMXL2O75526 392 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 HRASP01112 189 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 PPYP01298 95 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 TRBV12-3P01733 135 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 FCER2P06734 321 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 FRMD6-AS1P0C7T7 363 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 PTHLHP12272 177 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 CBX5P45973 191 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 ATP5G2Q06055 141 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 SNAPC3Q92966 411 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
CTDNEP1-205ENST00000570828 A0A087WXM4 84 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 TRBV9A0A0B4J1U6 114 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 H0Y980 276 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 MAS1LP35410 378 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 RPL27AP46776 148 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 FXYD4P59646 89 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZNF45Q02386 682 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 CATR1Q13166 79 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 UBE2NLQ5JXB2 153 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 SSX9Q7RTT3 188 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 TMEM17Q86X19 198 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 SGPP2Q8IWX5 399 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 PUSL1Q8N0Z8 303 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 NECAP1Q8NC96 275 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZBTB34Q8NCN2 500 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 TSPAN14Q8NG11 270 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 S100A16Q96FQ6 103 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 GPHA2Q96T91 129 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 AIFM2Q9BRQ8 373 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 SLC5A7Q9GZV3 580 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 CCL28Q9NRJ3 127 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 ADAM30Q9UKF2 790 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 ZNF257Q9Y2Q1 563 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 SORL1Q92673 2214 aa9.44□□□□□ -0.9
CTDNEP1-205ENST00000570828 MEIS3P1A6NDR6 274 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 SULT1C2O00338 296 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 XRCC3O43542 346 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR2J3O76001 311 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 TGFBR1P36897 503 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 HERV-K104P61576 105 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 RPL8P62917 257 aaKnown RBP9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 FAM209BQ5JX69 171 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 TMEM69Q5SWH9 247 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 LCN12Q6JVE5 192 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 SBSPONQ8IVN8 264 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 SPAG16Q8N0X2 631 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 SAMD12Q8N8I0 201 aa9.43□□□□□ -0.9
CTDNEP1-205ENST00000570828 OR5AP2Q8NGF4 316 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms