RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 YTHDF2Q9Y5A9 579 aaKnown RBP12.87□□□□□ -0.35
SMG6-207ENST00000570756 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 A0A1W2PS18 150 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
SMG6-207ENST00000570756 TOMM40O96008 361 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 CDKN1BP46527 198 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 PRRX1P54821 245 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 ST6GALNAC3Q8NDV1 305 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 V9GYV3 84 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 GCHFRP30047 84 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 CX3CL1P78423 397 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 ESPL1Q14674 2120 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 SPATA46Q5T0L3 261 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 TREML4Q6UXN2 200 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
SMG6-207ENST00000570756 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 CDIPTO14735 213 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 ZNF146Q15072 292 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 IGFBP7Q16270 282 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 MORN2Q502X0 79 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 KMT2EQ8IZD2 1858 aa12.85□□□□□ -0.35
SMG6-207ENST00000570756 AQP7O14520 342 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 NXPH2O95156 264 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 ZNF83P51522 516 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 BRWD1-AS2P59051 145 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 MGST2Q99735 147 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 GTF3C1Q12789 2109 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 NCKAP5O14513 1909 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 CEP192Q8TEP8 1941 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 RRHO14718 337 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 TSPOP30536 169 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 ERVK11-1P61568 191 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 RHOBP62745 196 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 MIC13Q5XKP0 118 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
SMG6-207ENST00000570756 OCIAD1Q9NX40 245 aa12.84□□□□□ -0.35
SMG6-207ENST00000570756 OOEPA6NGQ2 149 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 WISP2O76076 250 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 HLA-DQA1P01909 254 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 GDF1P27539 372 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 GNG4P50150 75 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 TMPRSS3P57727 454 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 TMPRSS7Q7RTY8 843 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.35
SMG6-207ENST00000570756 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 FRMD6-AS1P0C7T7 363 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 AREGP15514 252 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 STUMQ69YW2 141 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 OR52L2PQ8NGH6 319 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
SMG6-207ENST00000570756 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 M0R296 226 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 AMY1AP04745 511 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 CLDN18P56856 261 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 IL11RAQ14626 422 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 PNKDQ8N490 385 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
SMG6-207ENST00000570756 MS4A5Q9H3V2 200 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 DEPPQ9NTK1 212 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 KLF7O75840 302 aaPredicted RBP12.82□□□□□ -0.36
SMG6-207ENST00000570756 SRIP30626 198 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
SMG6-207ENST00000570756 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 TIPARPQ7Z3E1 657 aaKnown RBP12.82□□□□□ -0.36
SMG6-207ENST00000570756 GCNT2Q8N0V5 402 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 TMEM105Q8N8V8 129 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 WNT10AQ9GZT5 417 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 HEYLQ9NQ87 328 aaPredicted RBP12.82□□□□□ -0.36
SMG6-207ENST00000570756 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
SMG6-207ENST00000570756 HBZP02008 142 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 GFRA1P56159 465 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 NIT1Q86X76 327 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 IGHV2OR16-5A0A0B4J2B6 119 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 HELTA6NFD8 242 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 HAND1O96004 215 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 CA2P00918 260 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 OR1C1Q15619 314 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms