RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 RRASP10301 218 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 GNB3P16520 340 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 GNG2P59768 71 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 IDNKQ5T6J7 187 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 ZNF57Q68EA5 555 aaPredicted RBP8.27□□□□□ -1.09
VPS53-207ENST00000570510 C11orf45Q8TAV5 145 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 SETD6Q8TBK2 473 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 LGALS14Q8TCE9 139 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 C15orf40Q8WUR7 153 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 BORCS5Q969J3 196 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 FUNDC2Q9BWH2 189 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 PARP12Q9H0J9 701 aaKnown RBP8.27□□□□□ -1.09
VPS53-207ENST00000570510 C11orf54Q9H0W9 315 aaPredicted RBP8.27□□□□□ -1.09
VPS53-207ENST00000570510 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 RDH8Q9NYR8 311 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 C2orf70A6NJV1 201 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 IGLL5B9A064 214 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 MPPED1O15442 326 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 SCAF4O95104 1147 aaKnown RBP8.26□□□□□ -1.09
VPS53-207ENST00000570510 GABARAPO95166 117 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 APOA1P02647 267 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 CT45A6P0DMU7 189 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 CT45A5P0DMU8 189 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 CT45A7P0DMV0 189 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 RPS19P39019 145 aaKnown RBP8.26□□□□□ -1.09
VPS53-207ENST00000570510 RORCP51449 518 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 NANOS2P60321 138 aaKnown RBP8.26□□□□□ -1.09
VPS53-207ENST00000570510 ATP5G2Q06055 141 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 UBE2NLQ5JXB2 153 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 RBPMS2Q6ZRY4 209 aaKnown RBP8.26□□□□□ -1.09
VPS53-207ENST00000570510 PDPNQ86YL7 162 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 RABL2AQ9UBK7 228 aaPredicted RBP8.26□□□□□ -1.09
VPS53-207ENST00000570510 RABL2BQ9UNT1 228 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 SELENOKQ9Y6D0 94 aa8.26□□□□□ -1.09
VPS53-207ENST00000570510 IGKV1-6A0A0C4DH72 117 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 H0YJW9 148 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 APOA2P02652 100 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 APELAP0DMC3 54 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 ALDH3B2P48448 385 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 MXD1Q05195 221 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 CBX3Q13185 183 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 EXOSC2Q13868 293 aaKnown RBP8.25□□□□□ -1.09
VPS53-207ENST00000570510 TMEM177Q53S58 311 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 RPL39P5Q59GN2 51 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 MZT2AQ6P582 158 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 H1FOOQ8IZA3 346 aaPredicted RBP8.25□□□□□ -1.09
VPS53-207ENST00000570510 SLC38A6Q8IZM9 456 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 ZBTB34Q8NCN2 500 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 SLC25A38Q96DW6 304 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 GINS4Q9BRT9 223 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 HDHD3Q9BSH5 251 aaPredicted RBP8.25□□□□□ -1.09
VPS53-207ENST00000570510 ANXA10Q9UJ72 324 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
VPS53-207ENST00000570510 SMIM31A0A1B0GVY4 71 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 ZNF320A2RRD8 509 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 BMPR1BO00238 502 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 SULT1C2O00338 296 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 HLA-DQB1P01920 261 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 GSTT2P0CG29 244 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 GSTT2BP0CG30 244 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 SMIM18P0DKX4 95 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 CBLN1P23435 193 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 ARPC4P59998 168 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 PLA2G7Q13093 441 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 GPR107Q5VW38 600 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 GPR141Q7Z602 305 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 HOGA1Q86XE5 327 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 TMEM61Q8N0U2 210 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 OR1L6Q8NGR2 347 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 RAB2BQ8WUD1 216 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 AIFM2Q9BRQ8 373 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 AUNIPQ9H7T9 357 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 SCPEP1Q9HB40 452 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 OR1A1Q9P1Q5 309 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 FBXL7Q9UJT9 491 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 OR2W1Q9Y3N9 320 aa8.24□□□□□ -1.09
VPS53-207ENST00000570510 TRAV18A0A075B6X5 111 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 TMEM235A6NFC5 223 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 FAM223BA6NKX1 122 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 GGCTO75223 188 aaKnown RBP8.23□□□□□ -1.09
VPS53-207ENST00000570510 CLEC2LP0C7M8 214 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 ZNF182P17025 639 aaPredicted RBP8.23□□□□□ -1.09
VPS53-207ENST00000570510 CTRB1P17538 263 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 RPL5P46777 297 aaKnown RBP8.23□□□□□ -1.09
VPS53-207ENST00000570510 TMBIM6P55061 237 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 RHOGP84095 191 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 CTF1Q16619 201 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 FAM209BQ5JX69 171 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 CTRB2Q6GPI1 263 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 FAM223AQ8IWN6 122 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 CENPSQ8N2Z9 138 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 GVQW1Q8N7I0 195 aa8.23□□□□□ -1.09
VPS53-207ENST00000570510 DRAXINQ8NBI3 349 aaPredicted RBP8.23□□□□□ -1.09
VPS53-207ENST00000570510 ADAD2Q8NCV1 583 aaKnown RBP8.23□□□□□ -1.09
VPS53-207ENST00000570510 HSD17B10Q99714 261 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms