RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PLGLAQ15195 96 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 LY6EQ16553 131 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 OR4A16Q8NH70 328 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 GSX1Q9H4S2 264 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 BET1LQ9NYM9 111 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 TCF19Q9Y242 345 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 NSG2Q9Y328 171 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 UPK2O00526 184 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 RRHO14718 337 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 PFDN1O60925 122 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 SCGB1D2O95969 90 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 MTORP42345 2549 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 F2RL1P55085 397 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 Q6ZRM9 215 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 TEX45Q8NA69 505 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 OR4A5Q8NH83 315 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 WDR89Q96FK6 387 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 RANGRFQ9HD47 186 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 SONP18583 2426 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-219ENST00000570273 NSD1Q96L73 2696 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 NXPH3O95157 252 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 NDUFA3O95167 84 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 SRD5A1P18405 259 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 RAP2BP61225 183 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 CYCSP99999 105 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 RELBQ01201 579 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 SIGLECL1Q8N7X8 197 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 NPBQ8NG41 125 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 ASB13Q8WXK3 278 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 ST6GAL2Q96JF0 529 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 NMES1Q9C002 83 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 COA4Q9NYJ1 87 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 C1RLQ9NZP8 487 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 PITPNC1Q9UKF7 332 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 SIGLEC9Q9Y336 463 aa12.31□□□□□ -0.44
HERPUD1-219ENST00000570273 A6NDX4 124 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 C15orf61A6NNL5 157 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 CRYGBP07316 175 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 S100A10P60903 97 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 C5orf64Q2M2E5 130 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 Q6YL49 198 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 QTRT1Q9BXR0 403 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 ZNF430Q9H8G1 570 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 NAV3Q8IVL0 2385 aa12.3□□□□□ -0.44
HERPUD1-219ENST00000570273 PITX3O75364 302 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 OR2F2O95006 317 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 NKX2-1P43699 371 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 IER3P46695 156 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 RPL8P62917 257 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 PRSS8Q16651 343 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 LRRC37A5PQ49AS3 106 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 RBM14Q96PK6 669 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 NEURL2Q9BR09 285 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 PRDM13Q9H4Q3 707 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 PLSCR3Q9NRY6 295 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 TNFRSF19Q9NS68 423 aa12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 FOXA2Q9Y261 457 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-219ENST00000570273 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 GNB1P62873 340 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 CD300CQ08708 224 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 RAB32Q13637 225 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 CXorf66Q5JRM2 361 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 PPP1R1CQ8WVI7 109 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 OR51B2Q9Y5P1 312 aa12.28□□□□□ -0.44
HERPUD1-219ENST00000570273 SMLR1H3BR10 107 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms