RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RFX2P48378 723 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 HERV-K104P61576 105 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 TSPAN5P62079 268 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 MRPS10P82664 201 aaKnown RBP7.17□□□□□ -1.26
CAPN3-219ENST00000569136 ACTBL2Q562R1 376 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 POC5Q8NA72 575 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 OR4S2Q8NH73 311 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 VSTM2AQ8TAG5 236 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 ABHD5Q8WTS1 349 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 SECTM1Q8WVN6 248 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 SNAPC3Q92966 411 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 CLCC1Q96S66 551 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 SLA2Q9H6Q3 261 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 EHFQ9NZC4 300 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 MEIS3P1A6NDR6 274 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 H3BUA1 57 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 RGS5O15539 181 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 BRI3O95415 125 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 CA2P00918 260 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 PMP2P02689 132 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 TBPP20226 339 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 HLA-DMAP28067 261 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 RCVRNP35243 200 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 MAS1LP35410 378 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 RUNX1Q01196 453 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 SSBP1Q04837 148 aaKnown RBP7.16□□□□□ -1.26
CAPN3-219ENST00000569136 CATR1Q13166 79 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 EIF4EBP1Q13541 118 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-219ENST00000569136 PRSS8Q16651 343 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 KCTD9Q7L273 389 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 TMEM17Q86X19 198 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 SNX29P2Q8IUI4 249 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 ZNF491Q8N8L2 437 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 KLHL30-AS1Q8NEE0 82 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 LFNGQ8NES3 379 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 MYOZ3Q8TDC0 251 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 TCTEX1D2Q8WW35 142 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 FCAMRQ8WWV6 532 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 ARPC1AQ92747 370 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 RAB24Q969Q5 203 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 MOB3AQ96BX8 217 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 RBMXL1Q96E39 390 aaKnown RBP7.16□□□□□ -1.26
CAPN3-219ENST00000569136 C5orf30Q96GV9 206 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 ZNF2Q9BSG1 426 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-219ENST00000569136 CCL28Q9NRJ3 127 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 TMEM140Q9NV12 185 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 CCDC59Q9P031 241 aaKnown RBP7.16□□□□□ -1.26
CAPN3-219ENST00000569136 EXTL2Q9UBQ6 330 aa7.16□□□□□ -1.26
CAPN3-219ENST00000569136 A0A0G2JLM5 398 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 OR2A4O95047 310 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 HPRT1P00492 218 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 IFNA6P05013 189 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 GNRHRP30968 328 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 HRH1P35367 487 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 UCP3P55916 312 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 RAP2BP61225 183 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 RPL30P62888 115 aaKnown RBP7.15□□□□□ -1.26
CAPN3-219ENST00000569136 DEFA6Q01524 100 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 KIAA0141Q14154 515 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-219ENST00000569136 SPCS2Q15005 226 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 ECSCRQ19T08 205 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 VAX1Q5SQQ9 334 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 KPRPQ5T749 579 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-219ENST00000569136 Q6ZRM9 215 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 CADM3Q8N126 398 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 OR4A5Q8NH83 315 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 OR2A7Q96R45 310 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 P2RX4Q99571 388 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 SPIN2AQ99865 258 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 SPIN2BQ9BPZ2 258 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 KLK15Q9H2R5 256 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 TAS2R8Q9NYW2 309 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 MTFP1Q9UDX5 166 aa7.15□□□□□ -1.26
CAPN3-219ENST00000569136 A0A1W2PN81 502 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 MSGN1A6NI15 193 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 GABARAPH6UMI1 98 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 GPR31O00270 319 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 CTDSP2O14595 271 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 PGLYRP1O75594 196 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-219ENST00000569136 FCER2P06734 321 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 FGF2P09038 288 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 NQO2P16083 231 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 CHRNA7P36544 502 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 TAS2R31P59538 309 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 FXYD4P59646 89 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 GNB1P62873 340 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 NDPQ00604 133 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 PJVKQ0ZLH3 352 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 SLC25A42Q86VD7 318 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 SPAG16Q8N0X2 631 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 OR1N2Q8NGR9 330 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 GRPEL2Q8TAA5 225 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 DYNC2LI1Q8TCX1 351 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 DPF1Q92782 380 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 ISOC1Q96CN7 298 aa7.14□□□□□ -1.27
CAPN3-219ENST00000569136 DIRAS2Q96HU8 199 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms