RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 LGI3Q8N145 548 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 RNF175Q8N4F7 328 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 C11orf72Q8NBR9 251 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 OR1J4Q8NGS1 313 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 Q8WTZ3 238 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 OR10C1Q96KK4 312 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 MGLLQ99685 303 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 NAA38Q9BRA0 125 aaKnown RBP3.73□□□□□ -1.81
UBR1-208ENST00000569066 ZNF649Q9BS31 505 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 NDFIP1Q9BT67 221 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 CCDC167Q9P0B6 97 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 TBX21Q9UL17 535 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 ZSWIM8A7E2V4 1837 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 VWDEQ8N2E2 1590 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 DIP2BQ9P265 1576 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 FXYD1O00168 92 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 TRAPPC6AO75865 159 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 PGA4P0DJD7 388 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 PGA5P0DJD9 388 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 USF1P22415 310 aaPredicted RBP3.73□□□□□ -1.81
UBR1-208ENST00000569066 PPP1CBP62140 327 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 ELOBQ15370 118 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 CPTPQ5TA50 214 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 FAHD1Q6P587 224 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 TOMM20LQ6UXN7 152 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 Q8N7P7 452 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 NECAP1Q8NC96 275 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 BLNKQ8WV28 456 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 OR51I2Q9H344 312 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 LRTM1Q9HBL6 345 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 FKBP11Q9NYL4 201 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 VAX2Q9UIW0 290 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 LTN1O94822 1766 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 H7BYZ3 331 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 ENTPD6O75354 484 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 MPZL1O95297 269 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 HAND1O96004 215 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 MAS1P04201 325 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 OR10J1P30954 320 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 SDC2P34741 201 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 TNFSF9P41273 254 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 GABRA2P47869 451 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 CAV3P56539 151 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 TMEM267Q0VDI3 215 aaPredicted RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 RHEBQ15382 184 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 AMMECR1LQ6DCA0 310 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 OR2Y1Q8NGV0 311 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 HSPB8Q9UJY1 196 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 ERG28Q9UKR5 140 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 OR51B2Q9Y5P1 312 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 DNMT1P26358 1616 aaKnown RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 NALCNQ8IZF0 1738 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 MYO10Q9HD67 2058 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 A0A096LNJ9 63 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 ZNF878C9JN71 531 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 F5H768 121 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 PRTN3P24158 256 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 UCNP55089 124 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 PIGPP57054 158 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 MLLT11Q13015 90 aaPredicted RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 TIMM23BQ5SRD1 257 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 NEGR1Q7Z3B1 354 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 GKN2Q86XP6 184 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 TMEM25Q86YD3 366 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 GATSQ8NAP1 163 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 CHST4Q8NCG5 386 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 OR11G2Q8NGC1 345 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 NAT6Q93015 286 aa3.72□□□□□ -1.81
UBR1-208ENST00000569066 PHRF1Q9P1Y6 1649 aaKnown RBP3.72□□□□□ -1.81
UBR1-208ENST00000569066 DOCK8Q8NF50 2099 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 CCDC88AQ3V6T2 1871 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 PIK3C2AO00443 1686 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 TOPAZ1Q8N9V7 1692 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 RIMBP3Q9UFD9 1639 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 IGLV11-55A0A075B6I3 123 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 ARL5CA6NH57 179 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 ZNF727A8MUV8 499 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 YPEL1O60688 119 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 OPN1SWP03999 348 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 RPS12P25398 132 aaKnown RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 PSMA1P25786 263 aaKnown RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 IMPA1P29218 277 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 HINT1P49773 126 aaPredicted RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 HIST1H1AQ02539 215 aaPredicted RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 DHRS2Q13268 280 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 VKORC1L1Q8N0U8 176 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 KCNRGQ8N5I3 272 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 OR8G5Q8NG78 346 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 OR5D16Q8NGK9 328 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 YPEL2Q96QA6 119 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 DERL1Q9BUN8 251 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 ZNF471Q9BX82 626 aaPredicted RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 TXNL4BQ9NX01 149 aaKnown RBP3.71□□□□□ -1.82
UBR1-208ENST00000569066 NAT8Q9UHE5 227 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 LAMB4A4D0S4 1761 aa3.71□□□□□ -1.82
UBR1-208ENST00000569066 EIF2AK4Q9P2K8 1649 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms