RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 ANKRD34BA5PLL1 514 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 RBMXL2O75526 392 aaKnown RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 CRYZL1O95825 349 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 CT45A6P0DMU7 189 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 CT45A5P0DMU8 189 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 CT45A7P0DMV0 189 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 PPIAL4GP0DN37 164 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 SPP1P10451 314 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 GPR6P46095 362 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 RAB13P51153 203 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 GNB2P62879 340 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 RPP30P78346 268 aaKnown RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 BLOC1S1P78537 153 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 KRTAP24-1Q3LI83 254 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 FAM74A1Q5RGS3 127 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 HSD17B13Q7Z5P4 300 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 ABHD12Q8N2K0 398 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 OR5AN1Q8NGI8 311 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 OR5C1Q8NGR4 320 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 CITED4Q96RK1 184 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 TSNAXQ99598 290 aaKnown RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 ATP5SQ99766 215 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 RBKSQ9H477 322 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
COMMD4-221ENST00000567935 AMMECR1Q9Y4X0 333 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-221ENST00000567935 M0R1W7 72 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 OVOL3O00110 214 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 NXPH3O95157 252 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 MC5RP33032 325 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 DYNLT3P51808 116 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 UTF1Q5T230 341 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM14EPQ6UXP3 125 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 PUSL1Q8N0Z8 303 aaKnown RBP11.89□□□□□ -0.51
COMMD4-221ENST00000567935 C11orf42Q8N5U0 333 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 ST6GALNAC6Q969X2 333 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 RHOVQ96L33 236 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
COMMD4-221ENST00000567935 STRAPQ9Y3F4 350 aaKnown RBP11.89□□□□□ -0.51
COMMD4-221ENST00000567935 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 UMAD1C9J7I0 102 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 TRIM77I1YAP6 450 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 CST7O76096 145 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 IFNA5P01569 189 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 OR9G9P0C7N8 305 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 FAM157CP0CG43 387 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 IAPPP10997 89 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 LINC00205P59089 165 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 TGIF2LXQ8IUE1 241 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 KIR3DL3Q8N743 410 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 BSCL2Q96G97 398 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 SSBP3Q9BWW4 388 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 CLEC7AQ9BXN2 247 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 BARX1Q9HBU1 254 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
COMMD4-221ENST00000567935 FOXA2Q9Y261 457 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-221ENST00000567935 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 IGHV2-26A0A0B4J1V2 119 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 RAB19A4D1S5 217 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 H0YJW9 148 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 IFNA17P01571 189 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 FGF2P09038 288 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 RELBQ01201 579 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 CLINT1Q14677 625 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 AANATQ16613 207 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 PCNPQ8WW12 178 aaKnown RBP11.87□□□□□ -0.51
COMMD4-221ENST00000567935 PERPQ96FX8 193 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
COMMD4-221ENST00000567935 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 ZNF257Q9Y2Q1 563 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
COMMD4-221ENST00000567935 ZNF705EA8MWA4 302 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-221ENST00000567935 FBXO24O75426 580 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 IGLV1-47P01700 117 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 IL6RP08887 468 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms