RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GNG12Q9UBI6 72 aa19.27■□□□□ 0.68
LINC00543-201ENST00000567234 IGSF23A1L1A6 192 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 ZNF727A8MUV8 499 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 FAM90A26D6RGX4 464 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 CLDN1O95832 211 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 LOXL3P58215 753 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 RPL30P62888 115 aaKnown RBP19.26■□□□□ 0.67
LINC00543-201ENST00000567234 CCL8P80075 99 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 ZNF808Q8N4W9 903 aaPredicted RBP19.26■□□□□ 0.67
LINC00543-201ENST00000567234 ACY3Q96HD9 319 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 SRD5A3Q9H8P0 318 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 CALYQ9NYX4 217 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 VAX2Q9UIW0 290 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 PSG11Q9UQ72 335 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 LAMP3Q9UQV4 416 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 ZFYVE26Q68DK2 2539 aa19.26■□□□□ 0.67
LINC00543-201ENST00000567234 LOC102723971A0A1B0GUV8 181 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 CCL21O00585 134 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 CYB561D1Q8N8Q1 229 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 MISP3Q96FF7 219 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 CISD1Q9NZ45 108 aaKnown RBP19.25■□□□□ 0.67
LINC00543-201ENST00000567234 ATXN7O15265 892 aaPredicted RBP19.25■□□□□ 0.67
LINC00543-201ENST00000567234 TMEM50AO95807 157 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 PAX9P55771 341 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 RPL23AP62750 156 aaKnown RBP19.25■□□□□ 0.67
LINC00543-201ENST00000567234 TMEM30BQ3MIR4 351 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 ZNF343Q6P1L6 599 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 PLPPR2Q96GM1 343 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 PYGO2Q9BRQ0 406 aa19.25■□□□□ 0.67
LINC00543-201ENST00000567234 TRGV10A0A0A0MS01 117 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 TRAV38-1A0A0B4J264 116 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 KBTBD11-OT1A0A1B0GTJ5 212 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 E7EQL1 145 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 CORO2AQ92828 525 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 R3HDM4Q96D70 268 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 LINC00574Q9H8X3 128 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 SAP30LQ9HAJ7 183 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 CLN8Q9UBY8 286 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 GAB2Q9UQC2 676 aa19.24■□□□□ 0.67
LINC00543-201ENST00000567234 CFAP46Q8IYW2 2715 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 DEFB108AA8MXU0 73 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 CD3EP07766 207 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 P0C879 139 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 GPR12P47775 334 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 PDLIM4P50479 330 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 CCL20P78556 96 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 EFNB3Q15768 340 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 C17orf58Q2M2W7 97 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 MS4A5Q9H3V2 200 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 NKX6-3A6NJ46 265 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 SYNGR2O43760 224 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 RAMP3O60896 148 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 GYPAP02724 150 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 GZMBP10144 247 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 APOBEC3AP31941 199 aaPredicted RBP19.23■□□□□ 0.67
LINC00543-201ENST00000567234 TAS2R30P59541 319 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 HAGHQ16775 308 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 DEFB108BQ8NET1 73 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 OR10A7Q8NGE5 316 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 CCL13Q99616 98 aa19.23■□□□□ 0.67
LINC00543-201ENST00000567234 RAB7AP51149 207 aa19.22■□□□□ 0.67
LINC00543-201ENST00000567234 BRWD1-AS2P59051 145 aa19.22■□□□□ 0.67
LINC00543-201ENST00000567234 IZUMO4Q1ZYL8 232 aa19.22■□□□□ 0.67
LINC00543-201ENST00000567234 GFI1BQ5VTD9 330 aa19.22■□□□□ 0.67
LINC00543-201ENST00000567234 ODF3L1Q8IXM7 274 aa19.22■□□□□ 0.67
LINC00543-201ENST00000567234 DIDO1Q9BTC0 2240 aaKnown RBP19.22■□□□□ 0.67
LINC00543-201ENST00000567234 C17orf98A8MV24 154 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 CLDN14O95500 239 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 LTC4SQ16873 150 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 BTNL3Q6UXE8 466 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 BBC3Q96PG8 261 aaPredicted RBP19.21■□□□□ 0.67
LINC00543-201ENST00000567234 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.21■□□□□ 0.67
LINC00543-201ENST00000567234 PPP5D1E7EU14 171 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 TMEM178BH3BS89 294 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 TGIF2LXQ8IUE1 241 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 OR1P1Q8NH06 330 aa19.21■□□□□ 0.67
LINC00543-201ENST00000567234 ROS1P08922 2347 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 FAM90A27PA6NNH2 459 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 LINC00473A8K010 186 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 B9A039 149 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 M0QZK8 103 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 RAB29O14966 203 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 GGCTO75223 188 aaKnown RBP19.2■□□□□ 0.66
LINC00543-201ENST00000567234 NXPH3O95157 252 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 DUTP33316 252 aaKnown RBP19.2■□□□□ 0.66
LINC00543-201ENST00000567234 DUX4L9Q6RFH8 374 aaPredicted RBP19.2■□□□□ 0.66
LINC00543-201ENST00000567234 ZNF295-AS1Q8N0V1 137 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 OR5C1Q8NGR4 320 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 PRO1933Q9H354 126 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 DYNLRB1Q9NP97 96 aa19.2■□□□□ 0.66
LINC00543-201ENST00000567234 S1PR2O95136 353 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 ZNF816Q0VGE8 651 aaPredicted RBP19.19■□□□□ 0.66
LINC00543-201ENST00000567234 FAM90A2PQ658T7 463 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 ZCCHC24Q8N2G6 241 aaKnown RBP19.19■□□□□ 0.66
LINC00543-201ENST00000567234 FAM216BQ8N7L0 139 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.19■□□□□ 0.66
LINC00543-201ENST00000567234 IFI27L2Q9H2X8 130 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 SDF2L1Q9HCN8 221 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 URGCP-MRPS24S4R325 110 aa19.19■□□□□ 0.66
LINC00543-201ENST00000567234 ARFGEF3Q5TH69 2177 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms