RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 TMEM187Q14656 261 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 Q6ZTC4 211 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 SLC7A6OSQ96CW6 309 aaPredicted RBP12.24□□□□□ -0.45
CDH3-205ENST00000566808 KCNK15Q9H427 330 aa12.24□□□□□ -0.45
CDH3-205ENST00000566808 IGLV11-55A0A075B6I3 123 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 LINC00473A8K010 186 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 TMEM14DPA8MWL7 114 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 DIRAS3O95661 229 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 IL6RP08887 468 aaPredicted RBP12.23□□□□□ -0.45
CDH3-205ENST00000566808 ZNF735P0CB33 412 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 AREGP15514 252 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 HLA-DMBP28068 263 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 SOHLH1Q5JUK2 328 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 CABLES2Q9BTV7 478 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 HSF4Q9ULV5 492 aa12.23□□□□□ -0.45
CDH3-205ENST00000566808 IRGMA1A4Y4 181 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 BET1O15155 118 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 SOCS1O15524 211 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 FABP7O15540 132 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 KBTBD11O94819 623 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
CDH3-205ENST00000566808 TAS2R43P59537 309 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 QRFPP83859 136 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 ZNF124Q15973 351 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 C1orf100Q5SVJ3 147 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 CENPSQ8N2Z9 138 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 VSTM2AQ8TAG5 236 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 CMSS1Q9BQ75 279 aaKnown RBP12.22□□□□□ -0.45
CDH3-205ENST00000566808 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
CDH3-205ENST00000566808 LPAR5Q9H1C0 372 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
CDH3-205ENST00000566808 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
CDH3-205ENST00000566808 RBM7Q9Y580 266 aaKnown RBP12.22□□□□□ -0.45
CDH3-205ENST00000566808 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 PNMA8CA0A1B0GUJ8 204 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 A0A1B0GW64 132 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 BPNT1O95861 308 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.45
CDH3-205ENST00000566808 CD3GP09693 182 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 DEFA4P12838 97 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 MAS1LP35410 378 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 IRF3Q14653 427 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 C1orf146Q5VVC0 180 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 DCUN1D5Q9BTE7 237 aa12.21□□□□□ -0.45
CDH3-205ENST00000566808 TRBV6-7A0A0A0MS04 114 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
CDH3-205ENST00000566808 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 E7EUB6 86 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 TGOLN2O43493 480 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 CELP19835 753 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 SMN1Q16637 294 aaKnown RBP12.2□□□□□ -0.46
CDH3-205ENST00000566808 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 Q6ZR54 194 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 Q8N1X5 172 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 ZNF485Q8NCK3 441 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 OR6M1Q8NGM8 313 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 CLEC2DQ9UHP7 191 aa12.2□□□□□ -0.46
CDH3-205ENST00000566808 MRPS7Q9Y2R9 242 aaKnown RBP12.2□□□□□ -0.46
CDH3-205ENST00000566808 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 C15orf61A6NNL5 157 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 MRPS14O60783 128 aaKnown RBP12.19□□□□□ -0.46
CDH3-205ENST00000566808 FCGR3BO75015 233 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 PSMD7P51665 324 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 KCTD9Q7L273 389 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 ARHGAP5-AS1Q96IT6 56 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 OR2A7Q96R45 310 aa12.19□□□□□ -0.46
CDH3-205ENST00000566808 APOBP04114 4563 aaKnown RBP12.19□□□□□ -0.46
CDH3-205ENST00000566808 WBP4O75554 376 aaKnown RBP12.18□□□□□ -0.46
CDH3-205ENST00000566808 REG1AP05451 166 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 RBMY1A1P0DJD3 496 aaKnown RBP12.18□□□□□ -0.46
CDH3-205ENST00000566808 RBMY1CP0DJD4 496 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 MIFP14174 115 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 RBMY1FQ15415 496 aaKnown RBP12.18□□□□□ -0.46
CDH3-205ENST00000566808 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 CBR4Q8N4T8 237 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 PHYHIPQ92561 330 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 PRELID3BQ9Y3B1 194 aa12.18□□□□□ -0.46
CDH3-205ENST00000566808 NDUFA4O00483 81 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 CD1AP06126 327 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 RPA2P15927 270 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDH3-205ENST00000566808 SSX9Q7RTT3 188 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
CDH3-205ENST00000566808 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 BSCL2Q96G97 398 aaPredicted RBP12.17□□□□□ -0.46
CDH3-205ENST00000566808 PECRQ9BY49 303 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 THYN1Q9P016 225 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
CDH3-205ENST00000566808 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
CDH3-205ENST00000566808 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms