RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 C11orf94C9JXX5 98 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 DVL1O14640 695 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
CMTM3-213ENST00000566756 FAM87AP0C7U9 286 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 FABP4P15090 132 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 PDLIM4P50479 330 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 FABP6P51161 128 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 TMEM170AQ8WVE7 144 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 SNRNP40Q96DI7 357 aaKnown RBP13.88□□□□□ -0.19
CMTM3-213ENST00000566756 MSL2Q9HCI7 577 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 IGF2RP11717 2491 aa13.88□□□□□ -0.19
CMTM3-213ENST00000566756 PIEZO1Q92508 2521 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 IGHV3-43A0A0B4J1X8 118 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 PROP1O75360 226 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 IGHV3-43DP0DP04 118 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 VDAC2P45880 294 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-213ENST00000566756 C4orf17Q53FE4 359 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 KCNIP4Q6PIL6 250 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 ZNF474Q6S9Z5 364 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-213ENST00000566756 GFRALQ6UXV0 394 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 RFESDQ8TAC1 157 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 BOD1L1Q8NFC6 3051 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 TRGV8A0A0C4DH27 118 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 ERVK-16P61578 105 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 PRAMEF5Q5TYX0 476 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 TPRX1Q8N7U7 411 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 OR2T10Q8NGZ9 312 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 OR1P1Q8NH06 330 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 GATAD1Q8WUU5 269 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 S100PBPQ96BU1 408 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 SLC25A15Q9Y619 301 aa13.87□□□□□ -0.19
CMTM3-213ENST00000566756 SPENQ96T58 3664 aaKnown RBP13.86□□□□□ -0.19
CMTM3-213ENST00000566756 PIEZO2Q9H5I5 2752 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 PRSS46E5RG02 174 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 IFNA10P01566 189 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 TLE1Q04724 770 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 C3orf36Q3SXR2 165 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 ACTL10Q5JWF8 245 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 TIMM23BQ5SRD1 257 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 GNG12Q9UBI6 72 aa13.86□□□□□ -0.19
CMTM3-213ENST00000566756 HEATR1Q9H583 2144 aaKnown RBP13.86□□□□□ -0.19
CMTM3-213ENST00000566756 PRR14LQ5THK1 2151 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 USF3Q68DE3 2245 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 DEFB108AA8MXU0 73 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 FCGR3BO75015 233 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 RAB7AP51149 207 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 LOXL3P58215 753 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 PKIAP61925 76 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 HNF4GQ14541 408 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 JOSD1Q15040 202 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-213ENST00000566756 PDZD11Q5EBL8 140 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-213ENST00000566756 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 TFF1P04155 84 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 NPPCP23582 126 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 TREML4Q6UXN2 200 aa13.85□□□□□ -0.19
CMTM3-213ENST00000566756 RP1L1Q8IWN7 2480 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-213ENST00000566756 TLN1Q9Y490 2541 aaKnown RBP13.84□□□□□ -0.19
CMTM3-213ENST00000566756 A8MXE2 369 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 EGR1P18146 543 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 LINC00205P59089 165 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 HOXA4Q00056 320 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-213ENST00000566756 RELBQ01201 579 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 DEFA6Q01524 100 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 EDDM3AQ14507 147 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 DDB2Q92466 427 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 S1PR3Q99500 378 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 PCGF1Q9BSM1 259 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 DCTN5Q9BTE1 182 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 IFI27L2Q9H2X8 130 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 FZR1Q9UM11 496 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 ATMQ13315 3056 aa13.84□□□□□ -0.19
CMTM3-213ENST00000566756 TRBV23-1A0A0A0MS06 115 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 M0R1X1 148 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 IGHV3-13P01766 116 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 STAG3L2P0CL84 134 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 STAG3L3P0CL85 134 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 GNB1P62873 340 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 RBPJQ06330 500 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 GCSAMQ8N6F7 178 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 NECAP1Q8NC96 275 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 OR2Z1Q8NG97 314 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 Q8TCH9 128 aa13.83□□□□□ -0.19
CMTM3-213ENST00000566756 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.19
CMTM3-213ENST00000566756 BSNQ9UPA5 3926 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 FNDC10F2Z333 226 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 CXorf1O96002 111 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 CGB3P0DN86 165 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 CGB7P0DN87 165 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 PAX1P15863 534 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 FOXL1Q12952 345 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 OR4S2Q8NH73 311 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
CMTM3-213ENST00000566756 GGTLC1Q9BX51 225 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms