RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 DPPA5A6NC42 116 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 HMX3A6NHT5 357 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 DHFRP00374 187 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 HRASP01112 189 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
RNF40-209ENST00000566703 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 IGKV1-13P0DP09 117 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 FOLR2P14207 255 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
RNF40-209ENST00000566703 GNG2P59768 71 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 MSMO1Q15800 293 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 C10orf55Q5SWW7 151 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 UBE2UQ5VVX9 321 aa11.32□□□□□ -0.6
RNF40-209ENST00000566703 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
RNF40-209ENST00000566703 TMEM235A6NFC5 223 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 KBTBD11O94819 623 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 OR2C1O95371 312 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 SCAND1P57086 179 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 OR4A5Q8NH83 315 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 TCTEX1D2Q8WW35 142 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 FANCD2OSQ96PS1 177 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 FYTTD1Q96QD9 318 aaKnown RBP11.31□□□□□ -0.6
RNF40-209ENST00000566703 PLEKHA3Q9HB20 300 aa11.31□□□□□ -0.6
RNF40-209ENST00000566703 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
RNF40-209ENST00000566703 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 E7EUB6 86 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 SSX5O60225 188 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 CD7P09564 240 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 CBLN1P23435 193 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 PSMB6P28072 239 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 DAPK2Q9UIK4 370 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 SPATA2Q9UM82 520 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
RNF40-209ENST00000566703 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 PPP5D1E7EU14 171 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.61e-7■■■□□ 14.8
RNF40-209ENST00000566703 NDUFB8O95169 186 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 CTRB1P17538 263 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 CTRB2Q6GPI1 263 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 YTHDF1Q9BYJ9 559 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 TAS2R8Q9NYW2 309 aa11.29□□□□□ -0.6
RNF40-209ENST00000566703 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
RNF40-209ENST00000566703 A0A0A6YYH2 397 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 TRBV7-1A0A0A6YYK4 115 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 A0A1B0GW64 132 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 SMIM30A4D0T7 59 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 A6NJ64 397 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 HLA-AP01891 365 aaKnown RBP11.28□□□□□ -0.6
RNF40-209ENST00000566703 HLA-GP17693 338 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 PSMB9P28065 219 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 ARL3P36405 182 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 CCDC140Q96MF4 163 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 SRSF8Q9BRL6 282 aaKnown RBP11.28□□□□□ -0.6
RNF40-209ENST00000566703 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 RHBDL2Q9NX52 303 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
RNF40-209ENST00000566703 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 A8MWP6 167 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 TMEM127O75204 238 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 JTBO76095 146 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 FGF2P09038 288 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 DEFA4P12838 97 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 AREGP15514 252 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 FCGR2CP31995 323 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 ARPC4P59998 168 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
RNF40-209ENST00000566703 BEST4Q8NFU0 473 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 CCL28Q9NRJ3 127 aa11.27□□□□□ -0.61
RNF40-209ENST00000566703 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 PPYP01298 95 aa11.26□□□□□ -0.61
RNF40-209ENST00000566703 SDC2P34741 201 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms