RNA–Protein interactions for RNA: ENST00000566685.1

GGA2-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 4

Gene GGA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-208	ENST00000566685	SRSF12	Q8WXF0	261 aa	Known RBP	12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	DGCR14	Q96DF8	476 aa	Known RBP	12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	ZNF486	Q96H40	463 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	RCC1L	Q96I51	464 aa	Known RBP	12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	RSRP1	Q9BUV0	290 aa		12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	GPR61	Q9BZJ8	451 aa		12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	TINAGL1	Q9GZM7	467 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	ZNF355P	Q9NSJ1	428 aa		12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	COMMD9	Q9P000	198 aa		12.81	□□□□□ -0.36
GGA2-208	ENST00000566685	MSGN1	A6NI15	193 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	GSTZ1	O43708	216 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	SOX15	O60248	233 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	SSBP2	P81877	361 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	RUNX1	Q01196	453 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	POU2AF1	Q16633	256 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	C18orf65	Q6ZTR6	163 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	MRPL41	Q8IXM3	137 aa	Known RBP	12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	DMBX1	Q8NFW5	382 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	TERB2	Q8NHR7	220 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	P2RX4	Q99571	388 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	MCRIP2	Q9BUT9	160 aa	Known RBP	12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	HRASLS	Q9HDD0	168 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	BET1L	Q9NYM9	111 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685	NOTCH3	Q9UM47	2321 aa		12.8	□□□□□ -0.36
GGA2-208	ENST00000566685		A0A0G2JLM5	398 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	DISC1	C4P0D8	188 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	BRI3	O95415	125 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	AKAIN1	P0CW23	69 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	PGAM2	P15259	253 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	ECI1	P42126	302 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	TPPP2	P59282	170 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	RPL8	P62917	257 aa	Known RBP	12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	KIAA0141	Q14154	515 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	MRGPRG-AS1	Q2M3A8	158 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	PHLDA2	Q53GA4	152 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	OR4A47	Q6IF82	309 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	SSX9	Q7RTT3	188 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	SLC25A42	Q86VD7	318 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	LINC00482	Q8N8I6	264 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	OR5T1	Q8NG75	326 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	ZFAND1	Q8TCF1	268 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	RAX2	Q96IS3	184 aa		12.79	□□□□□ -0.36
GGA2-208	ENST00000566685	TRGV3	P03979	118 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	FGF2	P09038	288 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	SCGB2B2	Q4G0G5	96 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	SAMD5	Q5TGI4	173 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	ETV3L	Q6ZN32	361 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	LHFPL1	Q86WI0	220 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	DPF1	Q92782	380 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	MS4A10	Q96PG2	267 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	SOST	Q9BQB4	213 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	SLC2A9	Q9NRM0	540 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	COA4	Q9NYJ1	87 aa		12.78	□□□□□ -0.36
GGA2-208	ENST00000566685	C13orf42	A0A1B0GVH6	325 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685		I3L521	148 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	S1PR2	O95136	353 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	OR8U8	P0C7N1	319 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	OR9G9	P0C7N8	305 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	HLA-G	P17693	338 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	PTBP1	P26599	531 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	LPAR6	P43657	344 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	RPL27A	P46776	148 aa	Known RBP	12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	RAB25	P57735	213 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	TBC1D26	Q86UD7	250 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	CADM3	Q8N126	398 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	OR11H1	Q8NG94	326 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	OR4D10	Q8NGI6	311 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	OR1N2	Q8NGR9	330 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	PRRT1	Q99946	306 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	NOTCH1	P46531	2555 aa		12.77	□□□□□ -0.37
GGA2-208	ENST00000566685	DPPA5	A6NC42	116 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	MARCH11	A6NNE9	402 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685		G3V4G9	280 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	DHFR	P00374	187 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	SERPINE2	P07093	398 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	LGALS1	P09382	135 aa	Known RBP	12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	RND3	P61587	244 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	DEFA6	Q01524	100 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	ZNF616	Q08AN1	781 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	DEFB136	Q30KP8	78 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	PYDC2	Q56P42	97 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	OXLD1	Q5BKU9	147 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	SPANXN2	Q5MJ10	180 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	CCDC71L	Q8N9Z2	235 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	CASTOR1	Q8WTX7	329 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	USMG5	Q96IX5	58 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	THAP7	Q9BT49	309 aa	Predicted RBP	12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	COMMD5	Q9GZQ3	224 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	GNB4	Q9HAV0	340 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	TMEM140	Q9NV12	185 aa		12.76	□□□□□ -0.37
GGA2-208	ENST00000566685	ANKRD20A5P	A0PJZ0	165 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	UPK2	O00526	184 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	SNAPC5	O75971	98 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	KRAS	P01116	189 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	ZNF735	P0CB33	412 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	APELA	P0DMC3	54 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	IGLL1	P15814	213 aa		12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	FAU	P35544	74 aa	Known RBP	12.75	□□□□□ -0.37
GGA2-208	ENST00000566685	PPP5C	P53041	499 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms