RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PPP1R27Q86WC6 154 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 MMD2Q8IY49 270 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 PUSL1Q8N0Z8 303 aaKnown RBP6.21□□□□□ -1.42
CDH1-208ENST00000565810 SLC35G3Q8N808 338 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 Q8N9W7 124 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 LHFPL5Q8TAF8 219 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 RBMXL1Q96E39 390 aaKnown RBP6.21□□□□□ -1.42
CDH1-208ENST00000565810 SEC22AQ96IW7 307 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 CLCC1Q96S66 551 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 PDCD10Q9BUL8 212 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 CHIAQ9BZP6 476 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 NPFFR1Q9GZQ6 430 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 OR51J1Q9H342 316 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 FBXL15Q9H469 300 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 RANBP3Q9H6Z4 567 aaPredicted RBP6.21□□□□□ -1.42
CDH1-208ENST00000565810 PLSCR3Q9NRY6 295 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 FKBP11Q9NYL4 201 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 PRR13Q9NZ81 148 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 CACFD1Q9UGQ2 172 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 PRNDQ9UKY0 176 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 SIGLEC9Q9Y336 463 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 ALG5Q9Y673 324 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 C7orf66A4D0T2 115 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 C5orf51A6NDU8 294 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 FAM25EA8MYX2 175 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 UPK2O00526 184 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 GPR137BO60478 399 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 KBTBD11O94819 623 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 CA2P00918 260 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 IGKV1-5P01602 117 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 HLA-DRB1P01911 266 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 CRYGBP07316 175 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 SULT1A3P0DMM9 295 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 SULT1A4P0DMN0 295 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 MAS1LP35410 378 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 RPL15P61313 204 aaKnown RBP6.2□□□□□ -1.42
CDH1-208ENST00000565810 GNB1P62873 340 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 RPL8P62917 257 aaKnown RBP6.2□□□□□ -1.42
CDH1-208ENST00000565810 UBA52P62987 128 aaKnown RBP6.2□□□□□ -1.42
CDH1-208ENST00000565810 PRSS8Q16651 343 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 ARSJQ5FYB0 599 aaPredicted RBP6.2□□□□□ -1.42
CDH1-208ENST00000565810 GGNBP1Q5YKI7 109 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 GSG1LQ6UXU4 331 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 C5orf56Q8N8D9 126 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 TMEM167AQ8TBQ9 72 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 GPR146Q96CH1 333 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 PRSS22Q9GZN4 317 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 COMMD5Q9GZQ3 224 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 MED28Q9H204 178 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
CDH1-208ENST00000565810 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.2□□□□□ -1.42
CDH1-208ENST00000565810 SONP18583 2426 aaKnown RBP6.19□□□□□ -1.42
CDH1-208ENST00000565810 A0A1B0GU03 582 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 C13orf42A0A1B0GVH6 325 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FAM181BA6NEQ2 426 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 DBX1A6NMT0 343 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FCN1O00602 326 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 KCNAB3O43448 404 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 CHST1O43916 411 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 ADAP1O75689 374 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 IFNA17P01571 189 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FGF2P09038 288 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 OR9G9P0C7N8 305 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 SLC25A6P12236 298 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 HLA-GP17693 338 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 BLCAPP62952 87 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 SMCO1Q147U7 214 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FXYD3Q14802 87 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 TNXAQ16473 311 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 NMSQ5H8A3 153 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 ZNF562Q6V9R5 426 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 Q6ZNX1 250 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 FAM71E2Q8N5Q1 922 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 OR1L8Q8NGR8 309 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 OR1S1Q8NH92 325 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 ABHD5Q8WTS1 349 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 ZNF430Q9H8G1 570 aaPredicted RBP6.19□□□□□ -1.42
CDH1-208ENST00000565810 COA4Q9NYJ1 87 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 MGAT4CQ9UBM8 478 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 CACNG5Q9UF02 275 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 NSG2Q9Y328 171 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 OR51B2Q9Y5P1 312 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 CUBNO60494 3623 aa6.19□□□□□ -1.42
CDH1-208ENST00000565810 TRAV3A0A0B4J244 114 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 A0A0B4J293 547 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 A0A0G2JRQ6 117 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 C15orf61A6NNL5 157 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 GOSR2O14653 212 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 IL6RP08887 468 aaPredicted RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 P0C879 139 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 RPL27AP46776 148 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 OR2B8PP59922 312 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 HSPE1P61604 102 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 CX3CL1P78423 397 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 CYCSP99999 105 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 RELBQ01201 579 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 TMEM267Q0VDI3 215 aaPredicted RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 PJVKQ0ZLH3 352 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 IZUMO4Q1ZYL8 232 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms