RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZNF766Q5HY98 468 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 FAM78AQ5JUQ0 283 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 Q6P435 159 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 MORN3Q6PF18 240 aaPredicted RBP5.29□□□□□ -1.56
PTPN9-204ENST00000564970 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 MOGAT3Q86VF5 341 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 MMD2Q8IY49 270 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 DEFB123Q8N688 67 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 RBMXL3Q8N7X1 1067 aaKnown RBP5.29□□□□□ -1.56
PTPN9-204ENST00000564970 CDRT4Q8N9R6 151 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 SMRP1Q8NCR6 262 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 PFN4Q8NHR9 129 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 TRIB1Q96RU8 372 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 ULBP3Q9BZM4 244 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 TMEM222Q9H0R3 208 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 ATG10Q9H0Y0 220 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 IL21Q9HBE4 155 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF331Q9NQX6 463 aaPredicted RBP5.29□□□□□ -1.56
PTPN9-204ENST00000564970 C20orf141Q9NUB4 165 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 DOCK6Q96HP0 2047 aa5.29□□□□□ -1.56
PTPN9-204ENST00000564970 SMCHD1A6NHR9 2005 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TRAV27A0A087WT01 109 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 IGHV1-24A0A0C4DH33 117 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 IZUMO1RA6ND01 250 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 NPIPB5A8MRT5 1133 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 UPK3BL1B0FP48 263 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 UPK3BL2E5RIL1 263 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 F5H768 121 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 M0QZQ0 153 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 BMPR1BO00238 502 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TNFSF11O14788 317 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 SNCGO76070 127 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 MT-CO3P00414 261 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TIMP1P01033 207 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 IGLV3-27P01718 113 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 GATA2P23769 480 aaPredicted RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 GATA3P23771 443 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF121P58317 390 aaPredicted RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TLE1Q04724 770 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 DPTQ07507 201 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 MYBPHQ13203 477 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 FHL1Q13642 323 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF141Q15928 474 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 FKBP1CQ5VVH2 108 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 OTPQ5XKR4 325 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 EBLN2Q6P2I7 272 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 SLC23A3Q6PIS1 610 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 LYZL2Q7Z4W2 148 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 MEX3DQ86XN8 651 aaKnown RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF695Q8IW36 515 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF525Q8N782 197 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 LINC01465Q8N7H1 131 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TEX45Q8NA69 505 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 NUP43Q8NFH3 380 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 CT55Q8WUE5 264 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 NEU4Q8WWR8 484 aaPredicted RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 NAT6Q93015 286 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 CLDN23Q96B33 292 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 NUS1Q96E22 293 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 UCN2Q96RP3 112 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 C19orf24Q9BVV8 132 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 RBM24Q9BX46 236 aaKnown RBP5.28□□□□□ -1.56
PTPN9-204ENST00000564970 PPDPFQ9H3Y8 114 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 ENY2Q9NPA8 101 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 LOXL2Q9Y4K0 774 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 RNF114Q9Y508 228 aa5.28□□□□□ -1.56
PTPN9-204ENST00000564970 TICRRQ7Z2Z1 1910 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 MDC1Q14676 2089 aaKnown RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 A0A087X0K7 114 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 A0A1W2PPV9 198 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 WIPF3A6NGB9 483 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 DDTLA6NHG4 134 aaPredicted RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 C17orf51A8MQB3 221 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 PLPP1O14494 284 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 SMAD7O15105 426 aaKnown RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 SSSCA1O60232 199 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 MPDU1O75352 247 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 AGFG2O95081 481 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 CLDN7O95471 211 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 CA3P07451 260 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 NHLRC4P0CG21 123 aaPredicted RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 NTF4P34130 210 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 OPRK1P41145 380 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 VDAC2P45880 294 aaPredicted RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 ARL4DP49703 201 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 RPL31P62899 125 aaKnown RBP5.27□□□□□ -1.57
PTPN9-204ENST00000564970 PSG4Q00888 419 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 RTL8BQ17RB0 113 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 PRSS53Q2L4Q9 553 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 MS4A18Q3C1V0 323 aa5.27□□□□□ -1.57
PTPN9-204ENST00000564970 DMRTC1Q5HYR2 192 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms