RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 S100GP29377 79 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 ARL14EPLP0DKL9 152 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 CYB561P49447 251 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 FXYD3Q14802 87 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 OR2M7Q8NG81 312 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
LINC00554-201ENST00000564841 GMPPAQ96IJ6 420 aaPredicted RBP13.61□□□□□ -0.23
LINC00554-201ENST00000564841 TMEM147Q9BVK8 224 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 BET1LQ9NYM9 111 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 CEP295Q9C0D2 2601 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 SPAARA0A1B0GVQ0 90 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 RBMXL2O75526 392 aaKnown RBP13.61□□□□□ -0.23
LINC00554-201ENST00000564841 DSCR4P56555 118 aaPredicted RBP13.61□□□□□ -0.23
LINC00554-201ENST00000564841 OR10P1Q8NGE3 313 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 CLEC7AQ9BXN2 247 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 TIMM9Q9Y5J7 89 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 AAED1Q7RTV5 226 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 MMD2Q8IY49 270 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 DEFB124Q8NES8 71 aa13.61□□□□□ -0.23
LINC00554-201ENST00000564841 CELA3AP09093 270 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 SRIP30626 198 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 ZNF808Q8N4W9 903 aaPredicted RBP13.6□□□□□ -0.23
LINC00554-201ENST00000564841 FAM122AQ96E09 287 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 ZPBPQ9BS86 351 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 YTHDF2Q9Y5A9 579 aaKnown RBP13.6□□□□□ -0.23
LINC00554-201ENST00000564841 NCKAP5O14513 1909 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 PDE6DO43924 150 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 LGALS4P56470 323 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 Q0VG73 95 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 Q56UQ5 140 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 MRPL54Q6P161 138 aaKnown RBP13.6□□□□□ -0.23
LINC00554-201ENST00000564841 CLEC2AQ6UVW9 174 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 Q6ZS49 121 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 Q8N7P7 452 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 RNF138Q8WVD3 245 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 NEUROG1Q92886 237 aa13.6□□□□□ -0.23
LINC00554-201ENST00000564841 TRAV24A0A0B4J272 114 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 FGF12P61328 243 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 PLA2G2CQ5R387 149 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
LINC00554-201ENST00000564841 IGLV3-32A0A0A0MS00 114 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 A0A1W2PPV4 95 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 CA2P00918 260 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 TNFSF4P23510 183 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 HTD2P86397 168 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 TRIP6Q15654 476 aaKnown RBP13.59□□□□□ -0.23
LINC00554-201ENST00000564841 NUDT10Q8NFP7 164 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 AKAP13Q12802 2813 aa13.59□□□□□ -0.23
LINC00554-201ENST00000564841 RPL31P62899 125 aaKnown RBP13.58□□□□□ -0.23
LINC00554-201ENST00000564841 SRSF6Q13247 344 aaKnown RBP13.58□□□□□ -0.23
LINC00554-201ENST00000564841 ABHD17BQ5VST6 288 aa13.58□□□□□ -0.23
LINC00554-201ENST00000564841 DRAM1Q8N682 238 aa13.58□□□□□ -0.23
LINC00554-201ENST00000564841 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.23
LINC00554-201ENST00000564841 GSX1Q9H4S2 264 aaPredicted RBP13.58□□□□□ -0.23
LINC00554-201ENST00000564841 GP6Q9HCN6 339 aa13.58□□□□□ -0.23
LINC00554-201ENST00000564841 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.23
LINC00554-201ENST00000564841 OR2T8A6NH00 312 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 TMEM11P17152 192 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 PRRX1P54821 245 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 RPL30P62888 115 aaKnown RBP13.58□□□□□ -0.24
LINC00554-201ENST00000564841 HOXA4Q00056 320 aaPredicted RBP13.58□□□□□ -0.24
LINC00554-201ENST00000564841 C3AR1Q16581 482 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 CTXN2P0C2S0 81 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 IGLL1P15814 213 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 CLDN15P56746 228 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 OR4F17Q8NGA8 305 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 KCNIP2Q9NS61 270 aa13.58□□□□□ -0.24
LINC00554-201ENST00000564841 ACACAQ13085 2346 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF324O75467 553 aaPredicted RBP13.57□□□□□ -0.24
LINC00554-201ENST00000564841 ARF1P84077 181 aaKnown RBP13.57□□□□□ -0.24
LINC00554-201ENST00000564841 MPV17L2Q567V2 206 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 SPATA31B1PQ5VZV4 182 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 KIR3DL3Q8N743 410 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 KCNS1Q96KK3 526 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 OR2H1Q9GZK4 316 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 CA1P00915 261 aaPredicted RBP13.57□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF883P0CG24 379 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 CA6P23280 308 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 SPATA12Q7Z6I5 190 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 OR10D3Q8NH80 312 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 MRGPRDQ8TDS7 321 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 TSKUQ8WUA8 353 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 FOXB1Q99853 325 aa13.57□□□□□ -0.24
LINC00554-201ENST00000564841 IGLC7A0M8Q6 106 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 ZNF318Q5VUA4 2279 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 DMXL2Q8TDJ6 3036 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 SMG1Q96Q15 3661 aaKnown RBP13.56□□□□□ -0.24
LINC00554-201ENST00000564841 PCSK5Q92824 1860 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 FOXH1O75593 365 aa13.56□□□□□ -0.24
LINC00554-201ENST00000564841 RHBDL1O75783 438 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms