RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TRIM63Q969Q1 353 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 A0A1W2PRX2 142 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 KBTBD11O94819 623 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 S1PR2O95136 353 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 KRASP01116 189 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 MAS1LP35410 378 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 FOXE3Q13461 319 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 PUSL1Q8N0Z8 303 aaKnown RBP12.55□□□□□ -0.4
RAB40C-208ENST00000564703 TMEM167AQ8TBQ9 72 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 FAM103A1Q9BTL3 118 aaKnown RBP12.55□□□□□ -0.4
RAB40C-208ENST00000564703 ZNF430Q9H8G1 570 aaPredicted RBP12.55□□□□□ -0.4
RAB40C-208ENST00000564703 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
RAB40C-208ENST00000564703 C3orf85A0A1B0GTC6 90 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 A0A1W2PN81 502 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 ARPC1BO15143 372 aaKnown RBP12.54□□□□□ -0.4
RAB40C-208ENST00000564703 B3GALNT1O75752 331 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 ATG12O94817 140 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 IGHG4P01861 327 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 PF4V1P10720 104 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 CHRNA7P36544 502 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 CRIP2P52943 208 aaPredicted RBP12.54□□□□□ -0.4
RAB40C-208ENST00000564703 BAK1Q16611 211 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 TCTEX1D4Q5JR98 221 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 OR4A47Q6IF82 309 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 OR4F17Q8NGA8 305 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 OR4F4Q96R69 305 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 SPIN2AQ99865 258 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 SPIN2BQ9BPZ2 258 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
RAB40C-208ENST00000564703 KCNIP3Q9Y2W7 256 aa12.54□□□□□ -0.4
RAB40C-208ENST00000564703 LINC00854A0A1B0GVQ3 168 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 NAP1L6A6NFF2 107 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 SNAPC5O75971 98 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 RPA2P15927 270 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 PPIFP30405 207 aaKnown RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 RPL8P62917 257 aaKnown RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 NDPQ00604 133 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 POU2AF1Q16633 256 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 SGPP2Q8IWX5 399 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 MINDY2Q8NBR6 621 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 SLC25A21Q9BQT8 299 aaPredicted RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
RAB40C-208ENST00000564703 TMEM140Q9NV12 185 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
RAB40C-208ENST00000564703 TNCP24821 2201 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 MARCH11A6NNE9 402 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 NUDT19A8MXV4 375 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 H0Y980 276 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 UPK2O00526 184 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 G6PCP35575 357 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 TRIM16LQ309B1 348 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 H2BFWTQ7Z2G1 175 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 COMMD5Q9GZQ3 224 aa12.52□□□□□ -0.41
RAB40C-208ENST00000564703 RPLP1P05386 114 aaKnown RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 IL7P13232 177 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 AKR1C4P17516 323 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 HLA-GP17693 338 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 RAB9AP51151 201 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 DHODHQ02127 395 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 CFHR3Q02985 330 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 SP6Q3SY56 376 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 SLC25A42Q86VD7 318 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 SDHCQ99643 169 aaPredicted RBP12.51□□□□□ -0.41
RAB40C-208ENST00000564703 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 AKIP1Q9NQ31 210 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
RAB40C-208ENST00000564703 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 PSMB8P28062 276 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 SLC6A1P30531 599 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-208ENST00000564703 ZNF846Q147U1 533 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 TREML4Q6UXN2 200 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 CADM3Q8N126 398 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
RAB40C-208ENST00000564703 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms