RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
COMMD4-210ENST00000564587 QTRT1Q9BXR0 403 aaKnown RBP12.63□□□□□ -0.39
COMMD4-210ENST00000564587 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
COMMD4-210ENST00000564587 ZNRD1Q9P1U0 126 aa12.63□□□□□ -0.39
COMMD4-210ENST00000564587 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
COMMD4-210ENST00000564587 NOTCH2Q04721 2471 aa12.63□□□□□ -0.39
COMMD4-210ENST00000564587 OOSP1A8MZH6 123 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 IFNA5P01569 189 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 NMBP08949 121 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 DYNLT3P51808 116 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 ZNF295-AS1Q8N0V1 137 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 PUSL1Q8N0Z8 303 aaKnown RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-210ENST00000564587 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 DPM3Q9P2X0 92 aa12.62□□□□□ -0.39
COMMD4-210ENST00000564587 VWC2LB2RUY7 222 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 LY6LH3BQJ8 138 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 CST7O76096 145 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 KBTBD11O94819 623 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 IGKV1-16P04430 117 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 ARG1P05089 322 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 ZFP36P26651 326 aaKnown RBP12.61□□□□□ -0.39
COMMD4-210ENST00000564587 REG1BP48304 166 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 RAB5CP51148 216 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 PAX2Q02962 417 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 MINOS1Q5TGZ0 78 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 OR5B3Q8NH48 314 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
COMMD4-210ENST00000564587 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-210ENST00000564587 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 TCF19Q9Y242 345 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 MINOS1-NBL1R4GNA1 71 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
COMMD4-210ENST00000564587 IGHV1-3A0A0C4DH29 117 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 A1L4Q6 167 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 ODF3BA8MYP8 253 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 FGF16O43320 207 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 OR2B8PP59922 312 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 TPTE2P1Q5T6R2 138 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 CCDC144NLQ6NUI1 221 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 CLEC9AQ6UXN8 241 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 TMEM217Q8N7C4 229 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-210ENST00000564587 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-210ENST00000564587 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 HEYLQ9NQ87 328 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-210ENST00000564587 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
COMMD4-210ENST00000564587 SPTAN1Q13813 2472 aaKnown RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 H3BP45 60 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 OR8U8P0C7N1 319 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SPP1P10451 314 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SLC25A16P16260 332 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SULT1A2P50226 295 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 DVL1P1P54792 670 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 RAB11AP62491 216 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 BLOC1S1P78537 153 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 LCN2P80188 198 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 TMEM267Q0VDI3 215 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 CLINT1Q14677 625 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 SIRT7Q9NRC8 400 aa12.59□□□□□ -0.39
COMMD4-210ENST00000564587 TBL2Q9Y4P3 447 aaKnown RBP12.59□□□□□ -0.39
COMMD4-210ENST00000564587 TRAV3A0A0B4J244 114 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
COMMD4-210ENST00000564587 NUDT19A8MXV4 375 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 UMAD1C9J7I0 102 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 TOX4O94842 621 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 CD1BP29016 333 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 VDAC2P45880 294 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-210ENST00000564587 LGALS4P56470 323 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.4
COMMD4-210ENST00000564587 PRCDQ00LT1 54 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 DIAPH2-AS1Q14236 149 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 MRPL41Q8IXM3 137 aaKnown RBP12.58□□□□□ -0.4
COMMD4-210ENST00000564587 LILRB2Q8N423 598 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 OR1L8Q8NGR8 309 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 GGACTQ9BVM4 153 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 COMMD5Q9GZQ3 224 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 PLEKHA3Q9HB20 300 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 LPAR2Q9HBW0 351 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms