RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 FXYD3Q14802 87 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 ZNF57Q68EA5 555 aaPredicted RBP13.12□□□□□ -0.31
RNF40-206ENST00000564260 THOC7Q6I9Y2 204 aaKnown RBP13.12□□□□□ -0.31
RNF40-206ENST00000564260 FAAP20Q6NZ36 180 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 MARCH1Q8TCQ1 289 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
RNF40-206ENST00000564260 SPIN2AQ99865 258 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 SPIN2BQ9BPZ2 258 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 NUBP2Q9Y5Y2 271 aa13.12□□□□□ -0.31
RNF40-206ENST00000564260 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 IL7P13232 177 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 NDPQ00604 133 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 BAK1Q16611 211 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 PRR31Q5SQ13 230 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 OR4A47Q6IF82 309 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 R3HDM4Q96D70 268 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 GPHA2Q96T91 129 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 SDHCQ99643 169 aaPredicted RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 C5orf66Q9H5L9 145 aa13.11□□□□□ -0.31
RNF40-206ENST00000564260 ZNF430Q9H8G1 570 aaPredicted RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
RNF40-206ENST00000564260 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 S1PR2O95136 353 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 CD28P10747 220 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 UCP1P25874 307 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 PSMB8P28062 276 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 LPAR6P43657 344 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 DHODHQ02127 395 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
RNF40-206ENST00000564260 HSD17B13Q7Z5P4 300 aaPredicted RBP13.1□□□□□ -0.31
RNF40-206ENST00000564260 DMBX1Q8NFW5 382 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 RTBDNQ9BSG5 229 aaPredicted RBP13.1□□□□□ -0.31
RNF40-206ENST00000564260 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 KCNIP3Q9Y2W7 256 aa13.1□□□□□ -0.31
RNF40-206ENST00000564260 TCRBV4S1A1TA0A5B7 111 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 ARPC1BO15143 372 aaKnown RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 EGR2P11161 476 aaPredicted RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 SSBP2P81877 361 aaPredicted RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 MRGPRG-AS1Q2M3A8 158 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 SLC25A42Q86VD7 318 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 OR4F17Q8NGA8 305 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 MYOZ3Q8TDC0 251 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 SRSF12Q8WXF0 261 aaKnown RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 RBMXL1Q96E39 390 aaKnown RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 OR4F4Q96R69 305 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 CLCC1Q96S66 551 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 CITED2Q99967 270 aaPredicted RBP13.09□□□□□ -0.31
RNF40-206ENST00000564260 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
RNF40-206ENST00000564260 UPK2O00526 184 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 ANXA3P12429 323 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 HLA-GP17693 338 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 CDX1P47902 265 aaPredicted RBP13.08□□□□□ -0.32
RNF40-206ENST00000564260 SRPXP78539 464 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 PJVKQ0ZLH3 352 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 TNXAQ16473 311 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 TCTEX1D4Q5JR98 221 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 ZNF329Q86UD4 541 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 IL22RA2Q969J5 263 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 LINC00527Q9UJ94 153 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 PRNDQ9UKY0 176 aa13.08□□□□□ -0.32
RNF40-206ENST00000564260 TEX13DA0A0J9YY54 714 aaPredicted RBP13.07□□□□□ -0.32
RNF40-206ENST00000564260 SNAPC5O75971 98 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 CDS2O95674 445 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 PI3P19957 117 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
RNF40-206ENST00000564260 RPL23AP62750 156 aaKnown RBP13.07□□□□□ -0.32
RNF40-206ENST00000564260 GNB1P62873 340 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 SRSF4Q08170 494 aaKnown RBP13.07□□□□□ -0.32
RNF40-206ENST00000564260 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 TMEM128Q5BJH2 165 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 UNQ5815/PRO19632Q6UWF5 114 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 VKORC1L1Q8N0U8 176 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 LFNGQ8NES3 379 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 OR5B3Q8NH48 314 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 COMMD5Q9GZQ3 224 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 FBXO7Q9Y3I1 522 aa13.07□□□□□ -0.32
RNF40-206ENST00000564260 G3V318 75 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms