RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KIR2DS2P43631 304 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 BRWD1-AS2P59051 145 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 C15orf32Q32M92 178 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 IL34Q6ZMJ4 242 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 SPAG16Q8N0X2 631 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
NME3-205ENST00000563854 TTC9CQ8N5M4 171 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 TMEM167AQ8TBQ9 72 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 ZMAT4Q9H898 229 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 HRASLSQ9HDD0 168 aa13.48□□□□□ -0.25
NME3-205ENST00000563854 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 H0Y980 276 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 IGHV3-23P01764 117 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 CSN3P07498 182 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 CBX5P45973 191 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 HERV-K104P61576 105 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 UBE2NLQ5JXB2 153 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 NECAP1Q8NC96 275 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 S100A16Q96FQ6 103 aaKnown RBP13.47□□□□□ -0.25
NME3-205ENST00000563854 PEMTQ9UBM1 199 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 FBXL7Q9UJT9 491 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 S4R3C0 116 aa13.47□□□□□ -0.25
NME3-205ENST00000563854 TNCP24821 2201 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 PPP5D1E7EU14 171 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 E7EUB6 86 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 REG1AP05451 166 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.25
NME3-205ENST00000563854 AREGP15514 252 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.25
NME3-205ENST00000563854 CATR1Q13166 79 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 AADACL3Q5VUY0 350 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 CROCCP3Q8IVE0 287 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 Q8N1Y9 231 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 SAMD12Q8N8I0 201 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 TSPAN14Q8NG11 270 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 OR5AP2Q8NGF4 316 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 EHFQ9NZC4 300 aa13.46□□□□□ -0.25
NME3-205ENST00000563854 A0A087WXM4 84 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.45□□□□□ -0.26
NME3-205ENST00000563854 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 NPIPB5A8MRT5 1133 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 XRCC3O43542 346 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 HLA-AP01891 365 aaKnown RBP13.45□□□□□ -0.26
NME3-205ENST00000563854 MAS1LP35410 378 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 RPS19P39019 145 aaKnown RBP13.45□□□□□ -0.26
NME3-205ENST00000563854 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 ZNF818PQ6ZRF7 136 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 GTSCR1Q86UQ5 136 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 ZBTB34Q8NCN2 500 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 YIPF6Q96EC8 236 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
NME3-205ENST00000563854 A0A1B0GW64 132 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 TNFAIP8O95379 198 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 ZNF735P0CB33 412 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 DEFA4P12838 97 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 RPA2P15927 270 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 HLA-GP17693 338 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 TAS2R20P59543 309 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 MSMO1Q15800 293 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 Q8N402 240 aa13.44□□□□□ -0.26
NME3-205ENST00000563854 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
NME3-205ENST00000563854 TMEM127O75204 238 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 S1PR2O95136 353 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 NDUFB8O95169 186 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 DHFRP00374 187 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 PMP2P02689 132 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 PSMB6P28072 239 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 RFX2P48378 723 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 DMBX1Q8NFW5 382 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 OR4A5Q8NH83 315 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 GIMAP1Q8WWP7 306 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 AIFM2Q9BRQ8 373 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 BET1LQ9NYM9 111 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 RYR3Q15413 4870 aa13.43□□□□□ -0.26
NME3-205ENST00000563854 STAB2Q8WWQ8 2551 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 TRAV3A0A0B4J244 114 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 RBFOX2O43251 390 aaKnown RBP eCLIP13.42□□□□□ -0.262e-10■■□□□ 12.7
NME3-205ENST00000563854 GGCTO75223 188 aaKnown RBP13.42□□□□□ -0.26
NME3-205ENST00000563854 OR2C1O95371 312 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 HPRT1P00492 218 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 RLN1P04808 185 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 NQO2P16083 231 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 ARL3P36405 182 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 TAS2R31P59538 309 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 CLEC19AQ6UXS0 136 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 OR5H2Q8NGV7 314 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 MUC7Q8TAX7 377 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
NME3-205ENST00000563854 ZNF2Q9BSG1 426 aaPredicted RBP13.42□□□□□ -0.26
NME3-205ENST00000563854 TUBA4BQ9H853 241 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 TMEM140Q9NV12 185 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 SIGLEC8Q9NYZ4 499 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 SELENOKQ9Y6D0 94 aa13.42□□□□□ -0.26
NME3-205ENST00000563854 C3orf84H3BNL1 204 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 CTRB1P17538 263 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms