RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CLEC2LP0C7M8 214 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 KIR2DS2P43631 304 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 BEST4Q8NFU0 473 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 OR5H6Q8NGV6 325 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 TCTEX1D2Q8WW35 142 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 SPATA2Q9UM82 520 aa13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-203ENST00000563798 TRAV18A0A075B6X5 111 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 A0A1B0GW64 132 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 IZUMO1RA6ND01 250 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 HMX3A6NHT5 357 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 E7EUB6 86 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 LGALS9O00182 355 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 RBFOX2O43251 390 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■□□ 17.3
VPS9D1-203ENST00000563798 HRASP01112 189 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 LYL1P12980 280 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 RPL27AP46776 148 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 HAGHQ16775 308 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 LINC00322Q6ZN03 302 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 SPATA25Q9BR10 227 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 TAS2R8Q9NYW2 309 aa13.04□□□□□ -0.32
VPS9D1-203ENST00000563798 OR2J3O76001 311 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 FCGR2CP31995 323 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 MXD1Q05195 221 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 FYTTD1Q96QD9 318 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 AUNIPQ9H7T9 357 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 CCL28Q9NRJ3 127 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 RYR2Q92736 4967 aa13.03□□□□□ -0.32
VPS9D1-203ENST00000563798 ZNF785A8K8V0 405 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 PPYP01298 95 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 FGF2P09038 288 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 CTRB1P17538 263 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 PSMB6P28072 239 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 ARPC4P59998 168 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 RPL8P62917 257 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 POU2AF1Q16633 256 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 IDNKQ5T6J7 187 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 CTRB2Q6GPI1 263 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 GPHB5Q86YW7 130 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 GIMAP1Q8WWP7 306 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 DIABLOQ9NR28 239 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 FBXL7Q9UJT9 491 aa13.02□□□□□ -0.33
VPS9D1-203ENST00000563798 DHFRP00374 187 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 HLA-GP17693 338 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 CBX5P45973 191 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 KCTD21Q4G0X4 260 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 ISOC1Q96CN7 298 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 TUBA4BQ9H853 241 aa13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 TECRQ9NZ01 308 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-203ENST00000563798 LOC100506127A0A0U1RQW1 187 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 DPPA5A6NC42 116 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 C2orf70A6NJV1 201 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 CGB1A6NKQ9 187 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 PPP5D1E7EU14 171 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 NDUFB8O95169 186 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 PTHLHP12272 177 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 AREGP15514 252 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 TAS2R31P59538 309 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 TIMM50Q3ZCQ8 353 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 OR4A47Q6IF82 309 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 SPAG16Q8N0X2 631 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 OR5AP2Q8NGF4 316 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 GPHA2Q96T91 129 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
VPS9D1-203ENST00000563798 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
VPS9D1-203ENST00000563798 TENM2Q9NT68 2774 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 IGLV11-55A0A075B6I3 123 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 OR2C1O95371 312 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 HPRT1P00492 218 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 FOLR2P14207 255 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 CATR1Q13166 79 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 CROCCP3Q8IVE0 287 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 CD300LFQ8TDQ1 290 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 NEURL2Q9BR09 285 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 SLC5A7Q9GZV3 580 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 PALMDQ9NP74 551 aa12.99□□□□□ -0.33
VPS9D1-203ENST00000563798 A8MWP6 167 aa12.98□□□□□ -0.33
VPS9D1-203ENST00000563798 TNFSF12O43508 249 aa12.98□□□□□ -0.33
VPS9D1-203ENST00000563798 XRCC3O43542 346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms