RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 PAX9P55771 341 aa8.79□□□□□ -1
RNF40-204ENST00000563683 HES1Q14469 280 aa8.79□□□□□ -1
RNF40-204ENST00000563683 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
RNF40-204ENST00000563683 RNF7Q9UBF6 113 aa8.79□□□□□ -1
RNF40-204ENST00000563683 C17orf98A8MV24 154 aa8.79□□□□□ -1
RNF40-204ENST00000563683 DEFA4P12838 97 aa8.79□□□□□ -1
RNF40-204ENST00000563683 RAB7AP51149 207 aa8.79□□□□□ -1
RNF40-204ENST00000563683 PRR27Q6MZM9 219 aa8.79□□□□□ -1
RNF40-204ENST00000563683 TBX15Q96SF7 602 aa8.79□□□□□ -1
RNF40-204ENST00000563683 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
RNF40-204ENST00000563683 TRAV38-1A0A0B4J264 116 aa8.79□□□□□ -1
RNF40-204ENST00000563683 MGST3O14880 152 aa8.79□□□□□ -1
RNF40-204ENST00000563683 NDUFB3O43676 98 aa8.79□□□□□ -1
RNF40-204ENST00000563683 VENTXO95231 258 aa8.79□□□□□ -1
RNF40-204ENST00000563683 EGR1P18146 543 aa8.79□□□□□ -1
RNF40-204ENST00000563683 ZNF726P1Q15940 193 aa8.79□□□□□ -1
RNF40-204ENST00000563683 LRRC75BQ2VPJ9 315 aa8.79□□□□□ -1
RNF40-204ENST00000563683 C20orf204Q6ZNR8 217 aa8.79□□□□□ -1
RNF40-204ENST00000563683 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
RNF40-204ENST00000563683 ZDHHC11Q9H8X9 412 aa8.79□□□□□ -1
RNF40-204ENST00000563683 PARD6AQ9NPB6 346 aa8.79□□□□□ -1
RNF40-204ENST00000563683 MANBALQ9NQG1 85 aa8.79□□□□□ -1
RNF40-204ENST00000563683 AHRRA9YTQ3 701 aa8.78□□□□□ -1
RNF40-204ENST00000563683 ACSM6Q6P461 480 aa8.78□□□□□ -1
RNF40-204ENST00000563683 ABHD12Q8N2K0 398 aa8.78□□□□□ -1
RNF40-204ENST00000563683 C9orf106Q8NAJ2 232 aa8.78□□□□□ -1
RNF40-204ENST00000563683 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
RNF40-204ENST00000563683 LSM10Q969L4 123 aaKnown RBP8.78□□□□□ -1
RNF40-204ENST00000563683 TECTAO75443 2155 aa8.78□□□□□ -1
RNF40-204ENST00000563683 hADV38S2A0JD32 116 aa8.78□□□□□ -1
RNF40-204ENST00000563683 NAPSAO96009 420 aa8.78□□□□□ -1
RNF40-204ENST00000563683 GYPAP02724 150 aa8.78□□□□□ -1
RNF40-204ENST00000563683 SUB1P53999 127 aaKnown RBP eCLIP8.78□□□□□ -1
RNF40-204ENST00000563683 SRSF6Q13247 344 aaKnown RBP8.78□□□□□ -1
RNF40-204ENST00000563683 SRSF7Q16629 238 aaKnown RBP eCLIP8.78□□□□□ -1
RNF40-204ENST00000563683 TMEM183BQ1AE95 376 aa8.78□□□□□ -1
RNF40-204ENST00000563683 Q6ZS49 121 aa8.78□□□□□ -1
RNF40-204ENST00000563683 OR4P4Q8NGL7 312 aa8.78□□□□□ -1
RNF40-204ENST00000563683 OR13A1Q8NGR1 328 aa8.78□□□□□ -1
RNF40-204ENST00000563683 SPSB4Q96A44 273 aa8.78□□□□□ -1
RNF40-204ENST00000563683 DAZAP1Q96EP5 407 aaKnown RBP8.78□□□□□ -1
RNF40-204ENST00000563683 PARLQ9H300 379 aa8.78□□□□□ -1
RNF40-204ENST00000563683 VSIRQ9H7M9 311 aa8.78□□□□□ -1
RNF40-204ENST00000563683 ADAMTS9Q9P2N4 1935 aa8.78□□□□□ -1
RNF40-204ENST00000563683 USF3Q68DE3 2245 aa8.78□□□□□ -1
RNF40-204ENST00000563683 APELAP0DMC3 54 aa8.78□□□□□ -1
RNF40-204ENST00000563683 TAS2R45P59539 299 aa8.78□□□□□ -1
RNF40-204ENST00000563683 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
RNF40-204ENST00000563683 RAMP3O60896 148 aa8.77□□□□□ -1
RNF40-204ENST00000563683 NPSP0C0P6 89 aa8.77□□□□□ -1
RNF40-204ENST00000563683 CD82P27701 267 aa8.77□□□□□ -1
RNF40-204ENST00000563683 TPPP2P59282 170 aa8.77□□□□□ -1
RNF40-204ENST00000563683 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1
RNF40-204ENST00000563683 ZNF525Q8N782 197 aa8.77□□□□□ -1
RNF40-204ENST00000563683 C20orf144Q9BQM9 153 aa8.77□□□□□ -1
RNF40-204ENST00000563683 NPY1RP25929 384 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 OPRK1P41145 380 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 GNB2P62879 340 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 PAFAH1B2P68402 229 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 RPL39P5Q59GN2 51 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 LRRC10Q5BKY1 277 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 DTX1Q86Y01 620 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 CRIM1Q9NZV1 1036 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 CACNA1BQ00975 2339 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 PSPNO60542 156 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 TNFSF13O75888 250 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 RHOBP62745 196 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 TOMM20LQ6UXN7 152 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 ELOVL1Q9BW60 279 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 WDR61Q9GZS3 305 aaKnown RBP8.77□□□□□ -1.01
RNF40-204ENST00000563683 SAP30LQ9HAJ7 183 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 TIMM9Q9Y5J7 89 aa8.77□□□□□ -1.01
RNF40-204ENST00000563683 ZNF503-AS2A6NEH8 195 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 NDUFB4O95168 129 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 IL3RAP26951 378 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 FOXF2Q12947 444 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 RNFT1Q5M7Z0 435 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 COL5A1-AS1Q5SY13 56 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 ZNF324BQ6AW86 544 aaPredicted RBP8.76□□□□□ -1.01
RNF40-204ENST00000563683 MOB3BQ86TA1 216 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 J3QR06 171 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 TOX4O94842 621 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 RPL31P62899 125 aaKnown RBP8.76□□□□□ -1.01
RNF40-204ENST00000563683 HOXA4Q00056 320 aaPredicted RBP8.76□□□□□ -1.01
RNF40-204ENST00000563683 MIC13Q5XKP0 118 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 SH2D2AQ9NP31 389 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 TUBG2Q9NRH3 451 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 CD99P14209 185 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 RTP5Q14D33 572 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 PSG5Q15238 335 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 FAM103A1Q9BTL3 118 aaKnown RBP8.76□□□□□ -1.01
RNF40-204ENST00000563683 LPAR2Q9HBW0 351 aa8.76□□□□□ -1.01
RNF40-204ENST00000563683 A0A0G2JRQ6 117 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 A6NNC1 897 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 COX7A2P2O60397 106 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 DKK1O94907 266 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 NTF3P20783 257 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms