RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 A0A075B6Q4 140 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 IGKV1D-8A0A087WSZ0 117 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 TRAV25A0A0B4J276 109 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 ZNF320A2RRD8 509 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 KBTBD11O94819 623 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 DTYMKP23919 212 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
NME3-204ENST00000563498 FABP5Q01469 135 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 TNFRSF9Q07011 255 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 ARL6IP1Q15041 203 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 VKORC1L1Q8N0U8 176 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 TMEM167AQ8TBQ9 72 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 MARC2Q969Z3 335 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 EEF1AKMT3Q96AZ1 226 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 VCXQ9H320 206 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 RBMX2Q9Y388 322 aaKnown RBP13.94□□□□□ -0.18
NME3-204ENST00000563498 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
NME3-204ENST00000563498 METTL21EPA6NDL7 271 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 IGLV2-14P01704 120 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 IGHV3-23P01764 117 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 HLA-DQB1P01920 261 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 CTXN2P0C2S0 81 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 HIST1H1BP16401 226 aaKnown RBP13.93□□□□□ -0.18
NME3-204ENST00000563498 ATF4P18848 351 aaPredicted RBP13.93□□□□□ -0.18
NME3-204ENST00000563498 PSMB6P28072 239 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 PMS2P11Q13670 270 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 CEMP1Q6PRD7 247 aaPredicted RBP13.93□□□□□ -0.18
NME3-204ENST00000563498 C19orf35Q6ZS72 473 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 Q6ZWC4 215 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 PUSL1Q8N0Z8 303 aaKnown RBP13.93□□□□□ -0.18
NME3-204ENST00000563498 OR4S2Q8NH73 311 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 HSD17B10Q99714 261 aaKnown RBP13.93□□□□□ -0.18
NME3-204ENST00000563498 DUSP21Q9H596 190 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 TPRKBQ9Y3C4 175 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 FRAS1Q86XX4 4008 aa13.93□□□□□ -0.18
NME3-204ENST00000563498 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 A0A1B0GW64 132 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 E7EUB6 86 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 PDCD5O14737 125 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 SCAF4O95104 1147 aaKnown RBP13.92□□□□□ -0.18
NME3-204ENST00000563498 C8orf88P0DMB2 117 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 BMI1P35226 326 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 RPL30P62888 115 aaKnown RBP13.92□□□□□ -0.18
NME3-204ENST00000563498 TM4SF20Q53R12 229 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 OR2B11Q5JQS5 317 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 BTNL8Q6UX41 500 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 SELENOKQ9Y6D0 94 aa13.92□□□□□ -0.18
NME3-204ENST00000563498 TRBV7-1A0A0A6YYK4 115 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 TRAV1-2A0A0B4J238 106 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 AREGP15514 252 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 CTRB1P17538 263 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 GALP22466 123 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 APOC4P55056 127 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 CTRB2Q6GPI1 263 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 RBPMS2Q6ZRY4 209 aaKnown RBP13.91□□□□□ -0.18
NME3-204ENST00000563498 LYG2Q86SG7 212 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 OR1L6Q8NGR2 347 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 CXorf58Q96LI9 332 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 MGLLQ99685 303 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 MRPL27Q9P0M9 148 aaKnown RBP13.91□□□□□ -0.18
NME3-204ENST00000563498 S4R3C0 116 aa13.91□□□□□ -0.18
NME3-204ENST00000563498 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 J3QRK9 145 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 UBE2CO00762 179 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 SPRY2O43597 315 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 RGS10O43665 173 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 NFYAP23511 347 aaPredicted RBP13.9□□□□□ -0.18
NME3-204ENST00000563498 ELLP55199 621 aaPredicted RBP13.9□□□□□ -0.18
NME3-204ENST00000563498 OR10A3P58181 314 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 EWSR1Q01844 656 aaKnown RBP eCLIP13.9□□□□□ -0.18
NME3-204ENST00000563498 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
NME3-204ENST00000563498 OR2C3Q8N628 320 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 DCSTAMPQ9H295 470 aa13.9□□□□□ -0.18
NME3-204ENST00000563498 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
NME3-204ENST00000563498 HRASP01112 189 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 CLEC3BP05452 202 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 BRWD1-AS2P59051 145 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 RPL8P62917 257 aaKnown RBP13.89□□□□□ -0.19
NME3-204ENST00000563498 UNQ9165/PRO28630Q6UXU0 137 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 SLC38A6Q8IZM9 456 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 TCTEX1D2Q8WW35 142 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 C5orf66Q9H5L9 145 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
NME3-204ENST00000563498 UFC1Q9Y3C8 167 aa13.89□□□□□ -0.19
NME3-204ENST00000563498 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 MFSD2BA6NFX1 497 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 DEFA4P12838 97 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 ZNF585BQ52M93 769 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 HACD4Q5VWC8 232 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 CNIH2Q6PI25 160 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 ZNF66Q6ZN08 573 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 MFSD4AQ8N468 514 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 OR4A5Q8NH83 315 aa13.88□□□□□ -0.19
NME3-204ENST00000563498 SPAG8Q99932 426 aaPredicted RBP13.88□□□□□ -0.19
NME3-204ENST00000563498 KIR2DL5BA0A0G2JN68 375 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 KIR2DL5BA0A0G2JPC4 375 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 MYOD1P15172 320 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms